Preface |
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xi | |
Acknowledgments |
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xiii | |
On the CD |
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xv | |
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1 Image Processing Basics |
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1 | |
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1 | |
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1.2 Definition of Image Processing |
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2 | |
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1.3 Introduction to ImageJ |
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10 | |
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1.4 Grayscale Image Processing Basics |
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13 | |
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1.5 Spatial Image Processing Basics |
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30 | |
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1.6 The Five Classes of Image Processing |
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32 | |
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1.7 Good Practice Considerations |
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34 | |
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35 | |
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1.9 Feedback on the Self-Assessment Questions |
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35 | |
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38 | |
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2 Segmentation and Classification |
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39 | |
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39 | |
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40 | |
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49 | |
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2.4 Good Practice Considerations |
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57 | |
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57 | |
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2.6 Feedback on the Self-Assessment Questions |
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57 | |
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59 | |
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3 Spatial Domain Filtering |
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61 | |
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61 | |
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3.2 Spatial Filtering Operations |
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62 | |
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74 | |
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3.4 Good Practice Considerations |
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74 | |
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75 | |
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3.6 Feedback on the Self-Assessment Questions |
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75 | |
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76 | |
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4 Frequency Domain Filtering |
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77 | |
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77 | |
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4.2 The Spatial Domain and the Frequency Domain |
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78 | |
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4.3 Frequency Domain Filtering |
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80 | |
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4.4 Good Practice Considerations |
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|
95 | |
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96 | |
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4.6 Feedback on the Self-Assessment Questions |
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96 | |
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100 | |
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5 Image Analysis Operations |
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101 | |
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101 | |
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102 | |
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5.3 Binary Image Operations |
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112 | |
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5.5 Good Practice Considerations |
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118 | |
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118 | |
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5.7 Feedback on Self-Assessment Questions |
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119 | |
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6 Image Data Formats and Image Compression |
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121 | |
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121 | |
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122 | |
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130 | |
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6.4 Good Practice Considerations |
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137 | |
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137 | |
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6.6 Feedback on Self-Assessment Questions |
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138 | |
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139 | |
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141 | |
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141 | |
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7.2 Blurring Arising from the Imaging System Itself |
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142 | |
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7.3 Geometrical Distortion |
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148 | |
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7.4 Gray-Level Inhomogeneity |
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151 | |
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7.5 Good Practice Considerations |
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156 | |
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156 | |
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7.7 Feedback on Self-Assessment Questions |
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156 | |
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159 | |
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161 | |
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161 | |
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162 | |
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8.3 Dimensionality and Number of Modalities |
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176 | |
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8.4 Visualization of Registered Images |
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177 | |
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179 | |
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8.6 Good Practice Considerations |
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183 | |
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183 | |
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8.8 Feedback on Self-Assessment Questions |
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183 | |
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185 | |
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9 Visualization and 3-D Methods |
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187 | |
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187 | |
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9.2 Taxonomy for Visualization |
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188 | |
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9.3 Scene-Based Visualization |
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188 | |
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9.4 Object-Based Visualization |
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200 | |
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9.5 Other Visualization Methods |
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201 | |
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9.6 Good Practice Considerations |
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202 | |
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202 | |
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9.8 Feedback on Self-Assessment Questions |
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204 | |
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206 | |
10 Good Practice |
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207 | |
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207 | |
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207 | |
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210 | |
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211 | |
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10.5 Information Technology |
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213 | |
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223 | |
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10.9 Feedback on Self-Assessment Questions |
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223 | |
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224 | |
11 Case Studies |
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225 | |
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225 | |
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225 | |
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230 | |
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241 | |
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250 | |
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256 | |
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264 | |
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264 | |
12 For Instructors |
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267 | |
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267 | |
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12.2 Writing Macros and Plugins for ImageJ |
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267 | |
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12.3 Article-Based Case Studies |
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269 | |
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12.4 Extensions to Material in Preceding Chapters |
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270 | |
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12.5 Publicly Available Data |
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278 | |
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278 | |
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279 | |
Index |
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281 | |