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Part I: Sequence Alignments |
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Pairwise Sequence Alignment |
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1 | (1) |
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Spliced Alignment and Similarity-based Gene Recognition |
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1 | (1) |
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Multiple Sequence Alignment |
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1 | (1) |
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Parametric Sequence Alignment |
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1 | (1) |
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Part II: String Data Structures |
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Lookup Tables, Suffix Trees and Suffix Arrays |
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1 | (1) |
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Suffix Tree Applications in Computational Biology |
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1 | (1) |
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Enhanced Suffix Arrays and Applications |
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1 | (1) |
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Part III: Genome Assembly and EST Clustering |
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Computational Methods for Genome Assembly |
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1 | (1) |
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Assembling the Human Genome |
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1 | (1) |
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Comparative Methods for Sequence Assembly |
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1 | (1) |
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Information Theoretic Approach to Genome Reconstruction |
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1 | (1) |
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Expressed Sequence Tags: Clustering and Applications |
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1 | (1) |
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Anantharaman Kalyanaraman |
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Algorithms for Large-Scale Clustering and Assembly of Biological Sequence Data |
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1 | (1) |
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Anantharaman Kalyanaraman |
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Part IV: Genome-Scale Computational Methods |
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Comparisons of Long Genomic Sequences: Algorithms and Applications |
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1 | (1) |
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Chaining Algorithms and Applications in Comparative Genomics |
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1 | (1) |
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Computational Analysis of Alternative Splicing |
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1 | (1) |
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Human Genetic Linkage Analysis |
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1 | (1) |
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1 | (1) |
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An Overview of Phylogeny Reconstruction |
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1 | (1) |
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Consensus Trees and Supertrees |
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1 | (1) |
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Large-scale Phylogenetic Analysis |
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1 | (1) |
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High-Performance Phylogeny Reconstruction |
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1 | (1) |
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Part VI: Microarrays and Gene Expression Analysis |
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Microarray Data: Annotation, Storage, Retrieval and Communication |
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1 | (1) |
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Computational Methods for Microarray Design |
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1 | (1) |
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Clustering Algorithms for Gene Expression Analysis |
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1 | (1) |
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Biclustering Algorithms: A Survey |
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1 | (1) |
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Identifying Gene Regulatory Networks from Gene Expression Data |
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1 | (1) |
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Modeling and Analysis of Gene Networks Using Feedback Control Theory |
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1 | (1) |
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Part VII: Computational Structural Biology |
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Predicting Protein Secondary and Supersecondary Structure |
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1 | (1) |
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Protein Structure Prediction with Lattice Models |
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1 | (1) |
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Protein Structure Determination via NMR Spectral Data |
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1 | (1) |
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Geometric and Signal Processing of Reconstructed 3D Maps of Molecular Complexes |
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1 | (1) |
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In Search of Remote Homolog |
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1 | (1) |
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Biomolecular Modeling using Parallel Supercomputers |
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1 | (1) |
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Part VIII: Bioinformatic Databases and Data Mining |
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String Search in External Memory: Data Structures and Algorithms |
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1 | (1) |
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Index Structures for Approximate Matching in Sequence Databases |
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1 | (1) |
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Algorithms for Motif Search |
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1 | (1) |
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Data Mining in Computational Biology |
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1 | (1) |
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Index |
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1 | |