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Bioinformatics and Computational Biology [Pehme köide]

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Bioinformatics and Computational Biology is a compendium of articles and papers that were presented at BIOCOMP '14, an international conference that serves researchers, scholars, professionals, students, and academicians.

Selected Topics include:

* Gene Expression and Representation, Microarray, Sequencing, Alignment, and Related Bioinformatics Issues

* Computational Biology and Medical Applications + Health Informatics and Related Issues

* Protein Classification and Structure Prediction, Folding, and Computational Structural Biology + Drug Design

* Machine Learning, Data and Information Mining + Signal Processing and Data Quality Enhancement + Databases

* Posters

* Late Breaking Papers and Position Papers: Bioinformatics and Computational Biology

Muu info

Includes topics such as: Gene Expression and Representation, Sequencing, Computational Biology and Medical Applications.
SESSION: GENE EXPRESSION AND REPRESENTATION, MICROARRAY, SEQUENCING, ALIGNMENT, AND RELATED BIOINFORMATICS ISSUES
Investigating the Stability of Housekeeping Genes Using Microarray Datasets
3(7)
Fariba Nosrati
Ayse Bener
Asli Uyar
A Comparative Analysis of Computational Indel Calling Pipelines for Next Generation Sequencing Data
10(6)
Jacob Porter
Jonathan Berkhahn
Liqing Zhang
Relevance of Information in Cell Signaling Pathways Using Default Logic
16(7)
Andrei Doncescu
Pierre Siegel
Tan Le
A Hybrid Clustering Algorithm and Functional Study of Gene Expression in Lung Adenocarcinoma
23(7)
Mohammad Shabbir Hasan
Zhong-Hui Duan
Gene Collector V1.1: A User-friendly Bilingual Gene Data Mining Software
30(7)
Christina Pacheco
Samuel Goncalves Lopes
Willyane de Paiva Silva
Jhony Lucas Cavalcante Silva
Renato Pedrosa Vasconcelos
Antonio Almir Araujo-Neto
Stela Mirla da Silva Felipe
Milca Magalhaes Dias de Carvalho Soares
Juliana Osorio Alves
Paula Matias Soares
Denise Pires Carvalho
Vania Marilande Ceccatto
An Algorithmic and Computational Approach to Open Reading Frames in Short dsdna Sequences: Evaluation of Carr S `Conjecture'
37(7)
Steven M. Carr
H. Todd Wareham
Donald Craig
Gene Expression Profile Classification in Random Feature Space
44(4)
Xiyi Hang
Grid Computing-Based Sequence Alignment
48(9)
Mohamed Shalaby
Yasser Kamal
SESSION: COMPUTATIONAL BIOLOGY AND MEDICAL APPLICATIONS + HEALTH INFORMATICS AND RELATED ISSUES
Intentionally-Linked Entities: A Database System for Health Care Informatics
57(6)
Vitit Kantabutra
Determining Biological Trends Using Machine Learning Techniques
63(7)
Regie Felix
Sky Adams
Nick Beck
Sophie D'Arcy
A Histogramming Neural-Net Image Classifier of Some Triatomin Vectors of Chagas Disease
70(6)
Jack Horner
Model of Diagnosis Knowledge Base Ontology Framework based on Clinical Practice Guidelines
76(6)
Hala Almutair
Samir El-Masri
An Image-Euclidean-Distance Classifier of Some Triatomine Vectors of Chagas Disease
82(6)
Jack Horner
Blood Vessel Detection in Images from Laser-Heated Skin
88(5)
Alireza Kavianpour
Simin Shoari
Behdad Kavianpour
Proposal of Smart Blood Banks Central Distribution System in Saudi Arabia
93(5)
Albatoul Althenyan
Samir El-Masri
Predicting the Co-receptors (CCR5 and CXCR4) of the Viruses R5, X4 and R5X4 that Cause AIDS (HIV-1) in Cells CD4 Using The Bayes Classifier
98(7)
Francisco Javier Luna Rosas
Julio Cesar Martinez Romo
Carlos Alejandro de Luna Ortega
Ricardo Mendoza Gonzalez
Valentin Lopez Rivas
Gricelda Medina Veloz
Biomechanical Evaluation for Fibular Allograft Combined with Impaction Bone Grafting in Treating the Femoral Head Necrosis: Thorough Debridement or Not?
105(7)
Guangquan Zhou
Xiumin Chen
Zhihui Pang
Yujing Xu
Wei He
Shaoyi Stephen Liao
Qinqun Chen
Honglai Zhang
Keratoconus Disease and Three-Dimensional Simulation of the Cornea throughout the Process of Cross-Linking Treatment
112(7)
Hilal Kaya
Abdullah Cavupoolu
Hasan Basri Cakmak
Baha Pen
Elif Calyk
A Bayesian Network Classilfier of some Triatomine Vectors of Chagas Disease
119(7)
Jack Horner
Treatment Ontology Framework of Clinical Practice Guidelines
126(7)
Eman Alqaissi
Samir El-Masri
SESSION: PROTEIN CLASSIFICATION AND STRUCTURE PREDICTION, FOLDING, AND COMPUTATIONAL STRUCTURAL BIOLOGY + DRUG DESIGN
An Efficient Algorithm for Protein-Protein Interaction Network Analysis to Discover Overlapping Functional Modules
133(5)
Ying Liu
Dynamic Protein-protein Interaction Networks and the Detection of Protein Complexes: An Overview
138(6)
Eileen Marie Hanna
Nazar Zaki
Erythritol Promotes Interfacial Stability of GAPDH
144(7)
Norbert W. Seidler
Jane M. Jones
Computational Methods for Protein-Protein Interaction Prediction
151(10)
Maad Shatnawi
SESSION: MACHINE LEARNING, DATA AND INFORMATION MINING + SIGNAL PROCESSING AND DATA QUALITY ENHANCEMENT + DATABASES
BIOBase: An Adaptable Biometric Tool & Database
161(6)
Christine Brown
Karl Ricanek
Devon Simmonds
Prediction and Rule Extraction of Major Histocompatibility Complex Class II Epitopes by Logic Minimization
167(7)
Clemente Aguilar-Bonavides
Raul Cruz-Cano
Cristina Lanzas
Automatic EEG Bad Epoch and Artifact Removal Using Clustering
174(8)
Elizabeth Hames
Mary Baker
A Master-Slave MPI Approach for NGS Data Mining
182(6)
Riccardo Zanella
Using Composite Digital Data to Improve the Interpretation of Analog Displays
188(6)
Robert Warner
BRATUMASS Source Separation: Multi-fractal Analysis for Near-field Microwave Signal Feature
194(5)
Limin Xiao
Zhifu Tao
Yizhou Yao
Meng Yao
Blair Fleet
Erik D. Goodman
Jinyao Yan
John R. Deller
Optimal Scaling Values for Time-frequency Distributions in Doppler Ultrasound Blood Flow Measurement
199(10)
Fabian Garcia Nocetti
Julio Solano Gonzalez
Ernesto Rubio Acosta
SESSION: POSTERS
KBase: An Integrated Knowledgebase for Predictive Biology and Environmental Research
209(2)
Anthony Palumbo
Jason Baumohl
Aaron Best
Jared Bischof
Benjamin Bowen
Thomas Brettin
Thomas Brown
Shane Canon
Stephen Chan
John-Marc Chandonia
Dylan Chivian
Ric Colasanti
Neal Conrad
Brian Davison
Matthew Dejongh
Paramvir Dehal
Narayan Desai
Scott Devoid
Terrence Disz
Meghan Drake
Janaka Edirisinghe
Gang Fang
Jose Pedro Lopes Faria
Mark Gerstein
Elizabeth Glass
Annette Greiner
Daniel Gunter
James Gurtowski
Nomi Harris
Travis Harrison
Fei He
Matthew Henderson
Christopher Henry
Adina Howe
Marcin Joachimiak
Kevin Keegan
Keith Keller
Guruprasad Kora
Sunita Kumari
Miriam Land
Folker Meyer
Steve Moulton
Pavel Novichkov
Taeyun Oh
Gary Olsen
Robert Olson
Daniel Olson
Ross Overbeek
Tobias Paczian
Bruce Parello
Shiran Pasternak
Sarah Poon
Gavin Price
Srivdya Ramakrishnan
Priya Ranjan
William Riehl
Pamela Ronald
Michael Schatz
Lynn Schriml
Samuel Seaver
Michael Sneddon
Roman Sutormin
Mustafa Syed
James Thomason
Nathan Tintle
William Trimble
Daifeng Wang
Doreen Ware
David Weston
Andreas Wilke
Fangfang Xia
Shinjae Yoo
Dantong Yu
Robert Cottingham
Sergei Maslov
Rick Stevens
Adam Arkin
Complex Networks Associated with Positive Selection and Drug Resistance in the Malaria Parasite
211(2)
Timothy Lilburn
Hong Cai
Yufeng Wang
Real-time Photoacoustic Tomography using Linear Array Transducer and Its Phantom Evaluation
213(2)
Chul Gyu Song
Dong Won Lee
Bang Young Kim
Dong Ho Shin
An Interactive Visualization Tool to Interpret Transcriptomics Data
215(2)
Salil N. Pendse
Patrick D. McMullen
A Study of the Integration of Biomedical Devices with Information Technology Systems with an emphasis on Information Quality
217(4)
Jim McGinnis
SESSION: LATE BREAKING PAPERS AND POSITION PAPERS: BIOINFORMATICS AND COMPUTATIONAL BIOLOGY
Invited talk: Integrative Systems Biology Approaches to Identify Disrupted Pathways in Disease Development
221(2)
Mary Yang
SMIR: A Method to Predict the Residues Involved in the Core of a Protein
223(7)
Ruben Acuna
Zoe Lacroix
Jacques Chomilier
Nikolaos Papandreou
WMS4HPC, a Workflow Management System Bridge for High Performance Computing in Life Science Data Management
230(7)
Etienne Z. Gnimpieba
Carol M. Lushbough
Wavelet Packet Based Diagnosis of Sleep Apnea using ECG Data
237(7)
Syeda Quratulain Ali
Varun Jeoti
Samir Brahim Belhaouari
Biophotonic Algorithm of DNA Biophotonic Language of DNA
244(7)
Boucherit Taieb
Yagoubi Abdelkader
Bioinformatic Structure and Biophotonic Algorithm of the Brain
251(6)
Boucherit Taieb
Yagoubi Abdelkader
Review of Research on Biological Literature Text Mining
257(7)
Meijing Kong
Le Zhang
Jun Wang
SBMLChecker, a Semantic Approach for SBML Model Reliability Evaluation
264(4)
Mathialakan Thavappiragasam
Carol M. Lushbough
Etienne Z. Gnimpieba
Biological System Analysis Using Integrated Bioinformatics Tools: Levels of the Central Dogma in Folate Mediate One-Carbon Metabolism (FOCM)
268(4)
Jordy Larson
Abalo Chango
Bill Conn
Carol M. Lushbough
Etienne Z. Gnimpieba
Discovering Association Rules and Classification for Biological Data using Data Mining Methods
272
John Tsiligaridis
Michael Pagela
Hamid R. Arabnia is Professor, Computer Science; Editor-in-Chief, The Journal of Supercomputing (Springer); Elected Fellow, Int'l Society of Intelligent Biological Medicine (ISIBM); The University of Georgia, Department of Computer Science.