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Part I Computational Methods for Microarray, Gene Expression Analysis, and Gene Regulatory Networks |
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1 A Technical Platform for Generating Reproducible Expression Data from Streptomyces coelicolor Batch Cultivations |
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3 | (14) |
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2 MiRNA Recognition with the yasMiR System: The Quest for Further Improvements |
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17 | (10) |
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3 Top Scoring Pair Decision Tree for Gene Expression Data Analysis |
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27 | (10) |
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4 Predictive Minimum Description Length Principle Approach to Inferring Gene Regulatory Networks |
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37 | (8) |
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5 Parsimonious Selection of Useful Genes in Microarray Gene Expression Data |
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45 | (12) |
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Felix F. Gonzalez-Navarro |
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6 Hierarchical Signature Clustering for Time Series Microarray Data |
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57 | (10) |
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7 Microarray Database Mining and Cell Differentiation Defects in Schizophrenia |
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67 | (8) |
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8 miRNA Prediction Using Computational Approach |
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75 | (8) |
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9 Improving the Accuracy of Gene Expression Profile Classification with Lorenz Curves and Gini Ratios |
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83 | (8) |
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10 Feature Selection in Gene Expression Data Using Principal Component Analysis and Rough Set Theory |
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91 | (10) |
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11 Dramatically Reduced Precision in Microarray Analysis Retains Quantitative Properties and Provides Additional Benefits |
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101 | (12) |
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12 Algebraic Model Checking for Boolean Gene Regulatory Networks |
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113 | (10) |
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13 Comparative Advantages of Novel Algorithms Using MSR Threshold and MSR Difference Threshold for Biclustering Gene Expression Data |
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123 | (12) |
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14 Performance Comparison of SLFN Training Algorithms for DNA Microarray Classification |
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135 | (10) |
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15 Clustering Microarray Data to Determine Normalization Method |
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145 | (12) |
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Part II Bioinformatics Databases, Data Mining, and Pattern Discovery Techniques |
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16 Estimation, Modeling, and Simulation of Patterned Growth in Extreme Environments |
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157 | (14) |
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17 Performance of Univariate Forecasting on Seasonal Diseases: The Case of Tuberculosis |
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171 | (10) |
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Adhistya Erna Permanasari |
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Dayang Rohaya Awang Rambli |
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P. Dhanapal Durai Dominic |
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18 Predicting Individual Affect of Health Interventions to Reduce HPV Prevalence |
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181 | (10) |
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19 Decision Tree and Ensemble Learning Algorithms with Their Applications in Bioinformatics |
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191 | (10) |
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20 Pattern Recognition of Surface EMG Biological Signals by Means of Hilbert Spectrum and Fuzzy Clustering |
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201 | (10) |
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Ruben-Dario Pinzon-Morales |
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Katherine-Andrea Baquero-Duarte |
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Alvaro-Angel Orozco-Gutierrez |
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Victor-Hugo Grisales-Palacio |
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21 Rotation of Random Forests for Genomic and Proteomic Classification Problems |
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211 | (12) |
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22 Improved Prediction of MHC Class I Binders/Non-Binders Peptides Through Artificial Neural Network Using Variable Learning Rate: SARS Corona Virus, a Case Study |
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223 | (10) |
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Part III Protein Classification and Structure Prediction, and Computational Structural Biology |
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23 Fast Three-Dimensional Noise Reduction for Real-Time Electron Tomography |
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233 | (10) |
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24 Prediction of Chemical-Protein Binding Activity Using Contrast Graph Patterns |
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243 | (12) |
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25 Topological Constraint in High-Density Cells' Tracking of Image Sequences |
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255 | (8) |
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26 STRIKE: A Protein-Protein Interaction Classification Approach |
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263 | (8) |
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27 Cooperativity of Protein Binding to Vesicles |
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271 | (8) |
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28 The Role of Independent Test Set in Modeling of Protein Folding Kinetics |
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279 | (8) |
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Part IV Comparative Sequence, Genome Analysis, Genome Assembly, and Genome Scale Computational Methods |
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29 Branch-and-Bound Approach for Parsimonious Inference of a Species Tree from a Set of Gene Family Trees |
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287 | (10) |
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30 Sequence-Specific Sequence Comparison Using Pairwise Statistical Significance |
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297 | (10) |
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31 Modelling Short Time Series in Metabolomics: A Functional Data Analysis Approach |
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307 | (10) |
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32 Modeling of Gene Therapy for Regenerative Cells Using Intelligent Agents |
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317 | (10) |
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33 Biomarkers Discovery in Medical Genomics Data |
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327 | (8) |
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34 Computer Simulation on Disease Vector Population Replacement Driven by the Maternal Effect Dominant Embryonic Arrest |
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335 | (10) |
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35 Leukocytes Segmentation Using Markov Random Fields |
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345 | (12) |
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Part V Experimental Medicine and Analysis Tools |
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36 Ontology-Based Knowledge Discovery in Pharmacogenomics |
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357 | (10) |
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37 Enabling Heterogeneous Data Integration and Biomedical Event Prediction Through ICT: The Test Case of Cancer Reoccurrence |
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367 | (10) |
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38 Complexity and High-End Computing in Biology and Medicine |
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377 | (8) |
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39 Molecular Modeling Study of Interaction of Anthracenedione Class of Drug Mitoxantrone and Its Analogs with DNA Tetrameric Sequences |
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385 | (16) |
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40 A Monte Carlo Analysis of Peritoneal Antimicrobial Pharmacokinetics |
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401 | (12) |
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Part VI Computational Methods for Filtering, Noise Cancellation, and Signal and Image Processing |
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41 Histopathology Tissue Segmentation by Combining Fuzzy Clustering with Multiphase Vector Level Sets |
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413 | (12) |
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42 A Dynamically Masked Gaussian Can Efficiently Approximate a Distance Calculation for Image Segmentation |
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425 | (8) |
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43 Automatic and Robust System for Correcting Microarray Images' Rotations and Isolating Spots |
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433 | (8) |
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44 Multimodality Medical Image Registration and Fusion Techniques Using Mutual Information and Genetic Algorithm-Based Approaches |
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441 | (10) |
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45 Microcalcifications Detection Using Fisher's Linear Discriminant and Breast Density |
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451 | (10) |
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46 Enhanced Optical Flow Field of Left Ventricular Motion Using Quasi-Gaussian DCT Filter |
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461 | (10) |
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47 An Efficient Algorithm for Denoising MR and CT Images Using Digital Curvelet Transform |
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471 | (10) |
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48 On the Use of Collinear and Triangle Equation for Automatic Segmentation and Boundary Detection of Cardiac Cavity Images |
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481 | (8) |
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49 The Electromagnetic-Trait Imaging Computation of Traveling Wave Method in Breast Tumor Microwave Sensor System |
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489 | (8) |
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50 Medical Image Processing Using Novel Wavelet Filters Based on Atomic Functions: Optimal Medical Image Compression |
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497 | (8) |
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Anabelem Soberanes Martin |
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Rosa Maria Valdovinos Rosas |
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Jose Luis Sanchez Ramirez |
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Maria Dolores Torres Soto |
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51 Cancellation of Artifacts in ECG Signals Using Block Adaptive Filtering Techniques |
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505 | (10) |
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52 Segmentation of Medical Image Sequence by Parallel Active Contour |
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515 | (8) |
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53 Computerized Decision Support System for Mass Identification in Breast Using Digital Mammogram: A Study on GA-Based Neuro-Fuzzy Approaches |
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523 | (14) |
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Part VII Computer-Based Medical Systems |
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54 Optimization-Based Technique for Separation and Detection of Saccadic Movements and Eye-Blinking in Electrooculography Biosignals |
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537 | (10) |
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55 A Framework for Lipoprotein Ontology |
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547 | (8) |
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56 Verbal Decision Analysis Applied on the Optimization of Alzheimer's Disease Diagnosis: A Case Study Based on Neuroimaging |
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555 | (10) |
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Mirian Caliope Dantas Pinheiro |
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57 Asynchronous Brain Machine Interface-Based Control of a Wheelchair |
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565 | (8) |
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58 Toward an Application to Psychological Disorders Diagnosis |
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573 | (8) |
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Tareisio Cavalcante Pequeno |
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Mirian Caliope Dantas Pinheiro |
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59 Enhancing Medical Research Efficiency by Using Concept Maps |
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581 | (8) |
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60 Analysis of Neural Sources of P300 Event-Related Potential in Normal and Schizophrenic Participants |
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589 | (10) |
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61 Design and Development of a Tele-Healthcare Information System Based on Web Services and HL7 Standards |
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599 | (8) |
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62 Fuzzy Logic Based Expert System for the Treatment of Mobile Tooth |
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607 | (8) |
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63 A Microcomputer FES System for Wrist Moving Control |
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615 | (8) |
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64 Computer-Aided Decision System for the Clubfeet Deformities |
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623 | (14) |
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Marie Christine Ho Ba Tho |
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65 A Framework for Specifying Safe Behavior of the CIIP Medical System |
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637 | (10) |
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Part VIII Software Packages and Other Computational Topics in Bioinformatics |
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66 Lotka-Volterra System with Volterra Multiplier |
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647 | (10) |
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67 A Biological Compression Model and Its Applications |
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657 | (10) |
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68 Open Source Clinical Portals: A Model for Healthcare Information Systems to Support Care Processes and Feed Clinical Research |
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667 | (12) |
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69 Analysis and Clustering of MicroRNA Array: A New Efficient and Reliable Computational Method |
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679 | (10) |
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70 Stochastic Simulations of Mixed-Lipid Compartments: From Self-Assembling Vesicles to Self-Producing Protocells |
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689 | (8) |
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71 A New Genetic Algorithm for Polygonal Approximation |
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697 | (12) |
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72 Challenges When Using Real-World Bio-data to Calibrate Simulation Systems |
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709 | (8) |
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73 Credibility of Digital Content in a Healthcare Collaborative Community |
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717 | (8) |
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74 Using Standardized Numerical Scores for the Display and Interpretation of Biomedical Data |
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725 | (8) |
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75 ImagCell: A Computer Tool for Cell Culture Image Processing Applications in Bioimpedance Measurements |
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733 | (8) |
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76 From Ontology Selection and Semantic Web to an Integrated Information System for Food-borne Diseases and Food Safety |
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741 | (10) |
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77 Algebraic Analysis of Social Networks for Bio-surveillance: The Cases of SARS-Beijing-2003 and AH1N1 Influenza-Mexico-2009 |
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751 | (12) |
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