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E-book: Hybrid Systems Biology: Fourth International Workshop, HSB 2015, Madrid, Spain, September 4-5, 2015. Revised Selected Papers

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  • Series: Lecture Notes in Computer Science 9271
  • Pub. Date: 09-Jan-2016
  • Publisher: Springer International Publishing AG
  • Language: eng
  • ISBN-13: 9783319269160
  • Format - PDF+DRM
  • Price: 49,39 €*
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  • Format: PDF+DRM
  • Series: Lecture Notes in Computer Science 9271
  • Pub. Date: 09-Jan-2016
  • Publisher: Springer International Publishing AG
  • Language: eng
  • ISBN-13: 9783319269160

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This book constitutes the thoroughly referred post-workshop proceedings of the 4th International Workshop on Hybrid Systems biology, HSB 2015, held as part of the Madrid Meet 2015 event, in Madrid, Spain in September 2015. The volume presents 13 full papers together with 2 abstracts of invited sessions from 18 submissions. The scope of the HSB workshop is the general area of dynamical modelsin Biology with an emphasis on hybrid approaches - by no meansrestricted to a narrow class of mathematical models - and takingadvantage of techniques developed separately in different areas.

Statistical analysis.- Analysis andverification of continuous and hybrid models.- Quantitativeanalysis of biological models.- Application ofadvanced models on case studies.
Statistical Analysis
Reconstructing Statistics of Promoter Switching from Reporter Protein Population Snapshot Data
3(17)
Eugenio Cinquemani
Comparative Statistical Analysis of Qualitative Parametrization Sets
20(17)
Adam Streck
Kirsten Thobe
Heike Siebert
Analysis and Verification of Continuous and Hybrid Models
Parallelized Parameter Estimation of Biological Pathway Models
37(21)
R. Ramanathan
Yan Zhang
Jun Zhou
Benjamin M. Gyori
Weng-Fai Wong
P.S. Thiagarajan
High-Performance Discrete Bifurcation Analysis for Piecewise-Affine Dynamical Systems
58(17)
Lubos Brim
Martin Demko
Samuel Pastva
David Safranek
Integrating Time-Series Data in Large-Scale Discrete Cell-Based Models
75(21)
Louis Fippo Fitime
Christian Schuster
Peter Angel
Olivier Roux
Carito Guziolowski
Approximate Probabilistic Verification of Hybrid Systems
96(23)
Benjamin M. Gyori
Bing Liu
Soumya Paul
R. Ramanathan
P.S. Thiagarajan
Quantitative Analysis of Biological Models
Synthesising Robust and Optimal Parameters for Cardiac Pacemakers Using Symbolic and Evolutionary Computation Techniques
119(22)
Marta Kwiatkowska
Alexandru Mereacre
Nicola Paoletti
Andrea Patane
Model-Based Whole-Genome Analysis of DNA Methylation Fidelity
141(15)
Christoph Bock
Luca Bortolussi
Thilo Kruger
Linar Mikeev
Verena Wolf
Studying Emergent Behaviours in Morphogenesis Using Signal Spatio-Temporal Logic
156(17)
Ezio Bartocci
Luca Bortolussi
Dimitrios Milios
Laura Nenzi
Guido Sanguinetti
Efficient Reduction of Kappa Models by Static Inspection of the Rule-Set
173(22)
Andreea Beica
Calin C. Guet
Tatjana Petrov
Application of Advanced Models on Case Studies
Model Checking Tap Withdrawal in C. Elegans
195(16)
Md. Ariful Islam
Richard De Francisco
Chuchu Fan
Radu Grosu
Sayan Mitra
Scott A. Smolka
Solving General Auxin Transport Models with a Numerical Continuation Toolbox in Python: PyNCT
211(15)
Delphine Draelants
Przemyslaw Klosiewicz
Jan Broeckhove
Wim Vanroose
Analysis of Cellular Proliferation and Survival Signaling by Using Two Ligand/Receptor Systems Modeled by Pathway Logic
226(21)
Gustavo Santos-Garcia
Carolyn Talcott
Javier De Las Rivas
Posters and Tool Demos 247(2)
Author Index 249