Volume 1 |
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xvii | |
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xxxiii | |
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1 | (124) |
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1 Introduction to Emerging Areas in Bioengineering |
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3 | (18) |
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3 | (1) |
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3 | (1) |
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4 | (1) |
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1.1.3 Markets and Industries |
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5 | (1) |
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1.1.4 Scope of Biotechnology |
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6 | (1) |
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6 | (1) |
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1.2.1 History of Engineering |
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6 | (1) |
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1.2.2 Two Different Bioengineering |
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7 | (1) |
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1.2.3 Chemical Engineering |
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7 | (1) |
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1.2.3.1 The First Chemical Engineer |
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8 | (1) |
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1.2.4 Biochemical Engineering (1945-1978) |
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8 | (1) |
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1.2.4.1 Penicillin Production |
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8 | (1) |
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1.2.4.2 Mass Production of Penicillin |
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9 | (1) |
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1.2.5 Biochemical Engineering Education |
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10 | (1) |
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1.2.6 Biomedical Medical Engineering Activities (before 1970) |
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11 | (1) |
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12 | (1) |
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12 | (1) |
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1.3.2 Biological Engineering |
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12 | (1) |
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1.3.3 Bioengineering/Biological Engineering in Chemical Engineering Department |
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13 | (1) |
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14 | (1) |
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1.3.5 Marine Biotechnology |
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14 | (1) |
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1.3.5.1 Marine Biotechnology |
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15 | (1) |
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1.3.6 Environmental Biotechnology |
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15 | (1) |
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1.3.7 Biomedical Engineering |
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15 | (1) |
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1.3.8 Multidisciplinary (OMICS) Approach |
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17 | (1) |
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1.3.8.1 Biomusical Engineering |
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17 | (1) |
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1.3.8.2 Journal of Bioterrorism and Defense |
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17 | (1) |
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17 | (1) |
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18 | (1) |
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19 | (2) |
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2 Over-Expression of Functionally Active Inclusion Bodies of Enzymes in Recombinant Escherichia coli |
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21 | (14) |
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21 | (1) |
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2.2 Formation and Composition of IBs |
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21 | (3) |
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2.3 Enhancement of Protein Quality and Enzymatic Activity in IBs |
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24 | (1) |
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2.4 Applications of Enzyme-Based IBs |
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25 | (1) |
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2.5 An Example of IBs: N-acetyl-D-neuraminic Acid Aldolase |
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26 | (3) |
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29 | (1) |
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30 | (1) |
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30 | (5) |
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3 Enzymatic Reactions in Ionic Liquids |
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35 | (32) |
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35 | (2) |
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3.2 Enzymatic Reactions in Ionic Liquids |
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37 | (1) |
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3.2.1 Hydrolytic Enzymes in Ionic Liquids |
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39 | (1) |
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3.2.2 Nonhydrolytic Enzymes in Ionic Liquids |
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44 | (1) |
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3.2.2.1 Oxidoreductases in Ionic Liquids |
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44 | (1) |
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3.2.2.2 Other Enzymes in Ionic Liquids |
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46 | (1) |
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3.2.3 Whole Cell-Catalyzed Reactions in Ionic Liquids |
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47 | (1) |
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3.3 Factors Affecting Enzymatic Reactions in Ionic Liquids |
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47 | (2) |
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3.4 Methods to Improve Enzyme Activity and Stability in Ionic Liquids |
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49 | (1) |
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3.4.1 Modification of Enzymes |
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50 | (1) |
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3.4.2 Modification of Solvents |
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51 | (1) |
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3.4.3 Designing Enzyme-Compatible Ionic Liquids |
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52 | (1) |
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3.5 Conclusions and Perspectives |
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52 | (1) |
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Abbreviations of Ionic Liquids |
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53 | (1) |
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53 | (1) |
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53 | (1) |
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54 | (13) |
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4 Enzyme Immobilization on Nanoparticles: Recent Applications |
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67 | (14) |
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67 | (1) |
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4.2 Preparation of Enzyme-Immobilized Nanoparticles |
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68 | (1) |
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4.2.1 Physical Adsorption |
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68 | (1) |
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4.2.2 Encapsulation/Entrapment |
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69 | (1) |
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4.2.3 Covalent Attachments |
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70 | (1) |
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70 | (1) |
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4.2.5 Bioaffinity Interactions and Other Methods |
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71 | (1) |
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4.3 Application of Enzyme Nanoparticles |
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71 | (1) |
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4.3.1 EnNP for Biomedical Application |
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71 | (1) |
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4.3.1.1 EnNP for Thrombolytic Therapy |
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72 | (1) |
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4.3.1.2 EnNP for Inflammation and Oxidative Stress Therapy |
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72 | (1) |
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4.3.1.3 EnNP for Antibacterial Treatment |
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73 | (1) |
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4.3.2 EnNP for Biosensor Applications |
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73 | (1) |
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4.3.3 EnNP for Biofuel Production |
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75 | (1) |
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4.4 Conclusion and Perspectives |
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75 | (1) |
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76 | (5) |
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5 Whole Cell Biocatalysts Using Enzymes Displayed on Yeast Cell Surface |
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81 | (12) |
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Concise Definition of Subject |
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81 | (1) |
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81 | (1) |
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82 | (1) |
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5.3 C-Terminus Free Display Systems |
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83 | (1) |
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5.4 Applications of the Yeast Cell Surface Display System for Biocatalysts |
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84 | (1) |
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5.5 Improvement of Catalytic Activity on the Yeast Cell Surface |
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85 | (1) |
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5.5.1 Improvement of Gene Cassettes for Cell Surface Display |
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86 | (1) |
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5.5.2 Gene Deletion of Host Cells |
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87 | (1) |
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5.5.3 Ratio Optimization of Displaying Enzymes |
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87 | (1) |
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88 | (2) |
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90 | (3) |
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6 Design of Artificial Supramolecular Protein Assemblies by Enzymatic Bioconjugation for Biocatalytic Reactions |
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93 | (12) |
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Concise Definition of Subject |
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93 | (1) |
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93 | (1) |
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6.2 Protein Assembly on a Template with Specific Interaction/Reaction Sites |
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94 | (1) |
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6.2.1 Non-covalent Alignment on a Template |
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94 | (1) |
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6.2.2 Covalent Attachment to a Template |
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95 | (1) |
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6.2.2.1 Enzymes for Site-Specific Covalent Cross-linking of Proteins |
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95 | (1) |
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6.2.2.2 Site-Specific Covalent Cross-linking of Enzymes on Nucleic Acid Scaffolds |
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96 | (1) |
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6.3 Protein Assembly without a Template: Self-Assembly of Protein Units |
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97 | (1) |
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6.3.1 Non-covalent Assembly |
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97 | (1) |
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6.3.1.1 Self-Assembly by Peptide Assemblies |
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97 | (1) |
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6.3.1.2 Site-Specific Ligand- Receptor Interactions |
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98 | (1) |
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98 | (1) |
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6.3.2.1 Site-Specific Tyrosyl Radical Formation by Horseradish Peroxidase |
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98 | (2) |
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100 | (1) |
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101 | (1) |
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101 | (1) |
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101 | (4) |
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7 Production of Valuable Phenolic Compounds from Lignin by Biocatalysis: State-of-the-Art Perspective |
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105 | (20) |
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7.1 Lignin and Its Composition |
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105 | (1) |
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7.1.1 Composition of Lignin |
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105 | (1) |
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7.1.2 Process to Convert Lignin into Aromatic Monomers |
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105 | (1) |
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7.1.2.1 Extraction of Lignin from Lignocellulose |
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105 | (1) |
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7.1.2.2 Deconstruction of Lignin Using Physicochemical Processes |
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107 | (1) |
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7.1.2.3 Deconstruction of Lignin Using Biological Processes |
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107 | (5) |
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7.2 Phenol Derivatives Derived from Lignin Deconstruction |
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112 | (1) |
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7.3 Biocatalysis to Increase the Value of Lignin-Derived Phenolic Compounds |
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112 | (1) |
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7.3.1 Addition of an Extra Moiety |
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113 | (1) |
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113 | (1) |
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113 | (1) |
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7.3.2 Modification of Aromatic Ring Substituent |
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114 | (1) |
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7.3.2.1 Hydroxylation/Monooxygenation |
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115 | (1) |
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116 | (1) |
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116 | (1) |
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7.3.2.4 Decarboxylation/Carboxylation |
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117 | (1) |
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7.4 Outlook and Future Perspectives |
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118 | (1) |
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118 | (1) |
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118 | (7) |
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Part II Biofuels and Renewable Energy from Biomass |
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125 | (180) |
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8 Biofuels, Bio-Power, and Bio-Products from Sustainable Biomass: Coupling Energy Crops and Organic Waste with Clean Energy Technologies |
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127 | (36) |
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127 | (1) |
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8.2 Sustainable Biomass for Sustainable Development |
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127 | (1) |
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8.2.1 Food-Energy-Water (FEW) Nexus Concept: |
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128 | (1) |
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8.2.1.1 Sustainable Biomass |
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128 | (1) |
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8.2.1.2 Determining Biomass Sustainability |
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129 | (2) |
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8.3 Biorefineries and Bioenergy Conversion Pathways |
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131 | (1) |
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131 | (1) |
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8.3.2 Biomass-to-Bioenergy and Bio-products Conversion Pathways |
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132 | (1) |
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8.3.2.1 Biochemical Conversion Processes |
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132 | (1) |
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8.3.2.2 Thermochemical Conversion Processes of Biomass |
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142 | (12) |
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154 | (1) |
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154 | (6) |
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Further Reading/Resources |
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160 | (3) |
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9 Potential Lignocellulosic Biomass Resources in ASEAN Countries |
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163 | (10) |
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Syariffah Nuratiqah Syed Yaacob |
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9.1 Introduction and Characterization of Lignocellulosic Biomass in ASEAN Countries |
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163 | (2) |
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9.2 Forest Residues in ASEAN Countries |
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165 | (1) |
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9.3 Herbaceous Plants Residues in ASEAN Countries |
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165 | (3) |
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9.4 Agriculture Residue in ASEAN Countries |
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168 | (1) |
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9.5 ASEAN Government Programs and Policies on Natural Biomass |
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169 | (1) |
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170 | (3) |
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10 Volatile Fatty Acid Platform: Concept and Application |
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173 | (18) |
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10.1 Concept of Volatile Fatty Acid Platform |
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173 | (1) |
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10.1.1 Platforms for Biofuel Production |
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173 | (1) |
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173 | (1) |
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174 | (1) |
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10.1.2 Development of Volatile Fatty Acid Platform |
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175 | (1) |
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10.1.2.1 Anaerobic Digestion Process |
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175 | (1) |
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10.1.2.2 Mixed VFAs Fermentation |
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176 | (1) |
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10.1.2.3 VFA Platform Development |
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177 | (1) |
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10.1.3 Comparison of Biofuel Production Platforms |
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177 | (1) |
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10.1.3.1 Theoretical Comparison of Major Platforms for Ethanol Production |
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177 | (1) |
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10.1.3.2 Biomass Properties Needed for Each Platform |
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178 | (1) |
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10.1.3.3 Advantages and Disadvantages of Three Major Platforms |
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178 | (1) |
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10.2 Application of VFA Platform |
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179 | (1) |
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10.2.1 Pure and Mixed Acids as Chemicals |
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179 | (1) |
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10.2.2 VFA Conversion to Value-Added Products |
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180 | (1) |
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10.2.2.1 Mixed Alcohols, Esters, and Ketones |
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182 | (1) |
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10.2.2.2 Microbial Lipids and Polyhydroxyalkanoate (PHA) |
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182 | (2) |
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10.2.3 VFA Use as a Carbon Source of Denitrification Process |
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184 | (1) |
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10.2.4 Cost Analysis of Mixed Alcohol Produced from Various Raw Materials |
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185 | (1) |
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10.3 Tasks for Commercialization |
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186 | (1) |
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10.3.1 Technical Bottlenecks in Industrialization of the VFA Platform |
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186 | (1) |
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10.3.2 Commercialization Activities of VFA Platform |
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187 | (1) |
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188 | (3) |
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11 Biological Pretreatment of Lignocellulosic Biomass for Volatile Fatty Acid Production |
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191 | (12) |
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191 | (2) |
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11.2 Pretreatments to Improve VFA Production |
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193 | (1) |
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11.2.1 Physical Pretreatment |
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193 | (1) |
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11.2.2 Chemical Pretreatment |
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194 | (1) |
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11.2.3 Biological Pretreatment |
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194 | (1) |
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11.2.3.1 Microbial Pretreatment |
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194 | (1) |
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11.2.3.2 Enzymatic Pretreatment |
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195 | (1) |
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11.2.4 Combination Pretreatments |
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195 | (3) |
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11.3 Future Prospect and Recent Technology Development |
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198 | (1) |
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198 | (5) |
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12 Microbial Lipid Production from Volatile Fatty Acids by Oleaginous Yeast |
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203 | (12) |
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203 | (1) |
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203 | (1) |
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204 | (1) |
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204 | (1) |
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12.1.2.2 Metabolic Pathway |
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204 | (1) |
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205 | (2) |
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12.2 VFAs as a Carbon Source |
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207 | (2) |
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12.3 Quality of Yeast Lipid |
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209 | (1) |
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209 | (1) |
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12.3.2 Oleic Acid Component |
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209 | (1) |
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12.3.3 Microbial Lipid Cost Assessment |
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210 | (1) |
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12.3.4 Comparison with Oleaginous Yeast and Other Microorganisms |
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210 | (1) |
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210 | (1) |
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211 | (1) |
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211 | (4) |
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13 Gasification Technologies for Lignocellulosic Biomass |
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215 | (40) |
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215 | (1) |
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13.2 Gasification of Lignocellulosic Biomass |
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215 | (2) |
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13.3 Overview of Gasification Technologies of Lignocellulosic Biomass |
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217 | (1) |
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13.4 Classification of Gasification Technologies |
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218 | (1) |
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13.5 Types of Gasification Systems |
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219 | (1) |
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13.5.1 Direct or Autothermal Gasifiers |
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219 | (1) |
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13.5.1.1 Auger-Type Gasifiers |
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221 | (1) |
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13.5.1.2 Fixed (Moving) Bed Gasifiers |
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221 | (1) |
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13.5.1.3 Entrained Flow Gasifiers |
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221 | (1) |
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13.5.1.4 Fluidized Bed Gasifiers |
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223 | (1) |
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13.5.2 Indirect or Allo-Thermal Gasifiers |
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224 | (1) |
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13.5.2.1 Plasma or Plasma-Assisted Gasifiers |
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224 | (1) |
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13.5.2.2 Dual fluidized Bed Gasifiers |
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226 | (1) |
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13.5.2.3 Heat Pipe Gasifiers |
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228 | (1) |
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13.5.3 Advanced Gasifiers |
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229 | (1) |
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13.6 Performance Evaluation of Biomass Gasifiers |
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230 | (1) |
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13.6.1 Fixed (Moving) Bed Gasifiers |
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233 | (1) |
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13.6.2 Bubbling Fluidized Bed (BFB) Gasifiers |
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234 | (1) |
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13.6.3 Circulating Fluidized Bed (CFB) Gasifier |
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239 | (1) |
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13.6.4 Dual Fluidized Bed (DFB) Gasifiers |
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241 | (4) |
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13.7 Industrial Biomass Gasification Plants |
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245 | (3) |
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248 | (1) |
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248 | (7) |
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14 Separation of Butanol, Acetone, and Ethanol |
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255 | (32) |
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256 | (4) |
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14.2 Liquid-Liquid Extraction |
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260 | (2) |
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262 | (4) |
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266 | (5) |
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271 | (7) |
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278 | (1) |
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278 | (9) |
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15 Overview of Microalgae-Based Carbon Capture and Utilization |
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287 | (8) |
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287 | (1) |
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15.2 Capturing of Inorganic Carbon Using Photosynthesis |
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287 | (2) |
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15.3 Microalgal Biofuel Production |
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289 | (1) |
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15.3.1 Upstream Process: Strain Selection and Cultivation of the Selected Strain |
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289 | (1) |
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15.3.1.1 Strain Selection |
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289 | (1) |
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15.3.1.2 Cultivation Condition |
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290 | (1) |
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15.3.2 Downstream Process: Harvesting, Dewatering, Disruption, Extraction, and Transesterification |
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291 | (1) |
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15.4 Application of Microalgal By-Products |
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291 | (1) |
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291 | (1) |
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292 | (1) |
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292 | (3) |
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16 Bioengineering of Microbial Fuel Cells: From Extracellular Electron Transfer Pathway to Electroactive Biofilm |
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295 | (10) |
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16.1 Microbial Fuel Cells: General Concept and Extracellular Electron Transfer |
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295 | (2) |
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16.2 Electroactive Biofilm Meets with Biocompatible Materials |
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297 | (1) |
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16.3 Bioengineering of Electroactive Biofilm: From Bacteria to Ecosystem |
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298 | (1) |
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16.3.1 Engineering EET Pathways for Improved Electron Transfer |
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298 | (1) |
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16.3.2 Engineering of Electroactive Biofilm in Microbial Fuel Cells |
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299 | (1) |
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16.4 Conclusions and Future Perspectives |
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300 | (1) |
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301 | (1) |
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301 | (4) |
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Part III Synthetic Biology and Metabolic Engineering |
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305 | (68) |
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17 Genome Editing Tools for Escherichia coli and Their Application in Metabolic Engineering and Synthetic Biology |
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307 | (14) |
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307 | (1) |
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17.2 Homologous Recombination-Mediated Tools |
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308 | (1) |
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17.2.1 Antibiotic Resistance-Based Methods |
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308 | (1) |
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17.2.2 Double-Stranded DNA Break Repair System-Based Methods |
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309 | (1) |
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17.2.2.1 ZFNs/TALENs-Based Methods |
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310 | (1) |
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17.2.2.2 CRISPR/Cas9-Mediated Genome Engineering |
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310 | (2) |
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17.3 Single-Strand DNA-Mediated Recombination |
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312 | (1) |
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17.3.1 Multiplex Automated Genome Engineering (MAGE) |
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312 | (1) |
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313 | (1) |
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314 | (1) |
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314 | (7) |
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18 Synthetic Biology for Corynebacterium glutamicum: An Industrial Host for White Biotechnology |
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321 | (10) |
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321 | (2) |
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18.2 Synthetic Elements of Synthetic Biology for C. glutamicum |
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323 | (1) |
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18.2.1 DNA Parts and Plasmids of Synthetic Biology for C. glutamicum |
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323 | (1) |
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18.2.1.1 DNA Parts for C. glutamicum |
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323 | (1) |
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18.2.1.2 Synthetic Platform of Plasmids for C. glutamicum |
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324 | (1) |
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18.2.2 Devices and Genetic Biosensors of Synthetic Biology for C. glutamicum |
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324 | (1) |
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18.2.3 Synthetic Biology of a Chassis for C. glutamicum |
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326 | (1) |
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18.3 Conclusion and Outlook |
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326 | (1) |
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327 | (4) |
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19 Metabolic Engineering of Solventogenic Clostridia for Butanol Production |
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331 | (18) |
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331 | (1) |
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19.1.1 History of Solventogenic Clostridia |
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331 | (1) |
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19.1.2 Challenges for ABE Production by Fermentation |
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332 | (1) |
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19.2 Biomass and Its Metabolism |
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333 | (1) |
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19.2.1 General Characteristics of Sugar Metabolism |
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333 | (1) |
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334 | (1) |
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334 | (1) |
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335 | (1) |
|
|
335 | (1) |
|
|
336 | (1) |
|
19.3 Metabolic Engineering of Clostridia |
|
|
336 | (1) |
|
19.3.1 Genetic Tools for Clostridia |
|
|
336 | (1) |
|
19.3.2 Improvement of Butanol Titer, Yield, Productivity, and Selectivity |
|
|
337 | (1) |
|
19.3.3 Improvement of Pentose Utilization |
|
|
339 | (1) |
|
19.3.4 Sporulation and Solvent Production by Clostridia |
|
|
339 | (1) |
|
19.3.5 Metbolomics as a Tool for Engineering Clostridia |
|
|
341 | (1) |
|
19.4 Concluding Remarks and Future Perspectives |
|
|
341 | (1) |
|
|
341 | (8) |
|
20 Metabolic Engineering of Microorganisms for the Production of Lactate-Containing Polyesters |
|
|
349 | (10) |
|
|
|
|
|
355 | (1) |
|
|
355 | (4) |
|
21 Microbial Metabolic Engineering for Production of Food Ingredients |
|
|
359 | (14) |
|
|
|
|
21.1 Metabolic Engineering |
|
|
359 | (1) |
|
21.1.1 Rational Approaches for Metabolic Engineering |
|
|
359 | (1) |
|
21.1.2 Combinatorial Approaches for Metabolic Engineering |
|
|
360 | (1) |
|
21.2 Biological Production of Functional Food Materials |
|
|
361 | (1) |
|
21.2.1 Microbial Metabolic Engineering to Produce Human Milk Oligosaccharides (HMOs) |
|
|
361 | (1) |
|
21.2.1.1 2-Fucosyllactose (2-FL) |
|
|
361 | (1) |
|
21.2.1.2 Lacto-N-oligosaccharide Derivatives |
|
|
365 | (1) |
|
21.2.2 Microbial Metabolic Engineering to Produce Sugar Alcohols |
|
|
365 | (1) |
|
|
366 | (1) |
|
|
367 | (1) |
|
21.2.3 Microbial Metabolic Engineering to Produce Vitamins |
|
|
367 | (1) |
|
|
368 | (1) |
|
|
368 | (1) |
|
|
369 | (1) |
|
|
369 | (4) |
Volume 2 |
|
|
|
xix | |
|
|
xxxv | |
|
|
373 | (90) |
|
22 Application of Lactic Acid Bacteria for Food Biotechnology |
|
|
375 | (24) |
|
|
|
Concise Definition of Subject and Its Importance |
|
|
375 | (1) |
|
22.1 Lactic Acid Bacteria |
|
|
375 | (1) |
|
22.2 Expression Systems in LAB |
|
|
376 | (1) |
|
22.2.1 Constitutive Expression System |
|
|
376 | (1) |
|
22.2.2 Inducible Gene Expression System |
|
|
378 | (1) |
|
|
380 | (1) |
|
22.2.4 Food-Grade Gene Expression System |
|
|
381 | (1) |
|
22.2.4.1 Dominant Selection Markers |
|
|
381 | (1) |
|
22.2.4.2 Complementation Selection Markers |
|
|
381 | (1) |
|
22.3 In silico Metabolic Pathway Model for LAB |
|
|
382 | (1) |
|
22.3.1 Lactic Acid Production |
|
|
384 | (1) |
|
22.3.2 Diacetyl Production |
|
|
384 | (1) |
|
22.3.3 L-Alanine Production |
|
|
385 | (1) |
|
22.3.4 Acetaldehyde Production |
|
|
385 | (1) |
|
22.3.5 Mannitol Production |
|
|
386 | (1) |
|
|
386 | (1) |
|
22.3.7 Production of Polysaccharides |
|
|
387 | (1) |
|
22.4 The Prospect: Lactic Acid Bacteria as an Edible Therapeutic Probiotics |
|
|
387 | (3) |
|
|
390 | (9) |
|
23 Biopolymers Based on Raw Materials from Biomass |
|
|
399 | (30) |
|
|
|
399 | (1) |
|
23.2 Poly(butylene succinate) |
|
|
400 | (1) |
|
|
400 | (1) |
|
23.2.2 Physical Properties |
|
|
402 | (1) |
|
23.2.2.1 Thermal Properties |
|
|
402 | (1) |
|
23.2.2.2 Mechanical Properties |
|
|
402 | (1) |
|
|
404 | (1) |
|
|
405 | (1) |
|
23.2.3.1 Biodegradation in Compost |
|
|
405 | (2) |
|
23.2.4 Modification of PBS |
|
|
407 | (1) |
|
23.2.4.1 Modification with Inorganic Fillers |
|
|
407 | (1) |
|
23.2.4.2 Modification with Natural Fibers |
|
|
413 | (6) |
|
|
419 | (1) |
|
|
420 | (9) |
|
24 Bacterial Biofertilizers: High Density Cultivation |
|
|
429 | (12) |
|
|
|
|
429 | (1) |
|
24.2 Cultivation Strategies for a Few Important Bacterial Inoculants |
|
|
430 | (1) |
|
|
430 | (1) |
|
|
431 | (1) |
|
|
432 | (1) |
|
|
434 | (1) |
|
|
435 | (1) |
|
|
436 | (1) |
|
|
436 | (5) |
|
25 Current Research in Korean Herbal Cosmetics |
|
|
441 | (22) |
|
|
|
|
|
441 | (1) |
|
25.2 Korean Herbal Medicine and Bioscience |
|
|
442 | (1) |
|
25.2.1 Characteristics of Korean Herbal Cosmetics |
|
|
442 | (1) |
|
25.2.2 The Dermatological Effects of Medicinal Herbs |
|
|
442 | (1) |
|
25.2.3 Processing Methods to Strengthen Efficacy |
|
|
443 | (1) |
|
25.2.4 Traditional Korean Medical Principles in Cosmetics and Recent Research |
|
|
445 | (1) |
|
25.3 Bioprocessing of Natural Compounds in Traditional Herbal Medicine |
|
|
446 | (1) |
|
25.3.1 Enzymatic Deglycosylation of Green Tea Seed Flavonol Glycoside |
|
|
446 | (1) |
|
25.3.1.1 Purification and Identification of Compounds in Green Tea Seed |
|
|
447 | (1) |
|
25.3.1.2 Kaempferol Production from GTSE Using Glycolytic Enzymes |
|
|
448 | (1) |
|
25.3.1.3 DPPH Scavenging Activities of Two Tea Seed Flavonoids and Kaempferol |
|
|
449 | (1) |
|
25.3.2 Microbial Hydroxylation of Isoflavone in Soybean |
|
|
450 | (1) |
|
25.3.2.1 Purification and Identification of Compounds in KFS |
|
|
451 | (1) |
|
25.3.2.2 In Vitro Study of Anti-Melanogenesis Effect |
|
|
453 | (1) |
|
25.4 Skin Delivery Systems in Cosmetics |
|
|
454 | (1) |
|
25.4.1 Liposomes as Drug Carriers |
|
|
455 | (1) |
|
25.4.2 Polymer Micelles and Polymersomes |
|
|
456 | (1) |
|
25.4.3 Surface Modification of Liposomes Using Polymers |
|
|
457 | (1) |
|
25.4.4 Cosmetic Applications for Solid Lipid Nanoparticles |
|
|
458 | (1) |
|
|
458 | (1) |
|
|
459 | (4) |
|
Part V Biosensing and Nanobiotechnology |
|
|
463 | (128) |
|
26 Advanced Genetic Engineering of Microbial Cells for Biosensing Applications |
|
|
465 | (12) |
|
|
|
|
|
465 | (1) |
|
26.2 Genetic Engineering of Microbial Reporter Cells |
|
|
466 | (2) |
|
26.3 Methods to Immobilize Cells and Maintain Cell Viability |
|
|
468 | (1) |
|
26.4 Microbial Biosensors Based on Transducers |
|
|
469 | (1) |
|
26.4.1 Optical Microbial Biosensors |
|
|
469 | (1) |
|
26.4.2 Electrochemical Microbial Biosensors |
|
|
471 | (1) |
|
26.5 Conclusion and Future Prospects |
|
|
472 | (1) |
|
|
473 | (1) |
|
|
473 | (4) |
|
|
477 | (20) |
|
|
|
|
|
477 | (1) |
|
27.2 Concept of Bioelectronic Nose |
|
|
478 | (1) |
|
27.2.1 Primary Transducer |
|
|
478 | (1) |
|
27.2.2 Secondary Transducer |
|
|
479 | (1) |
|
27.3 Primary Transducer for Bioelectronic Nose |
|
|
479 | (1) |
|
27.3.1 Olfactory Receptor Protein |
|
|
479 | (1) |
|
27.3.2 Nanovesicle Containing Olfactory Receptor |
|
|
479 | (1) |
|
27.3.3 Peptide Derived from Olfactory Receptor Protein |
|
|
483 | (2) |
|
27.4 Secondary Transducer for Bioelectronic Nose |
|
|
485 | (1) |
|
27.4.1 Quartz Crystal Microbalance |
|
|
485 | (1) |
|
27.4.2 Surface Plasmon Resonance |
|
|
486 | (1) |
|
27.4.3 Field Effect Transistor |
|
|
486 | (1) |
|
|
487 | (1) |
|
27.5.1 Medical Applications |
|
|
488 | (1) |
|
|
490 | (1) |
|
27.5.3 Environmental Monitoring |
|
|
490 | (1) |
|
27.5.4 Other Applications |
|
|
492 | (1) |
|
|
492 | (1) |
|
|
493 | (1) |
|
|
494 | (3) |
|
28 Noninvasive Optical Imaging Techniques in Clinical Application |
|
|
497 | (12) |
|
|
|
28.1 Fluorescence Diagnosis of Skin or Mucosa |
|
|
498 | (1) |
|
|
498 | (1) |
|
|
499 | (2) |
|
28.2 Fluorescence Endoscopic Surgery |
|
|
501 | (1) |
|
|
501 | (1) |
|
28.2.2 Sentinel Lymph Node |
|
|
502 | (1) |
|
28.3 Fluorescence Image-Guided Intraoperative Open Surgery |
|
|
503 | (2) |
|
|
505 | (2) |
|
|
507 | (1) |
|
|
507 | (2) |
|
29 Advanced Short Tandem Repeat Genotyping for Forensic Human Identification |
|
|
509 | (22) |
|
|
|
|
29.1 DNA Sample Sources and Collection |
|
|
510 | (1) |
|
29.2 DNA Extraction from Biological Sources |
|
|
511 | (1) |
|
29.2.1 Off-Chip-Based DNA Extraction |
|
|
511 | (1) |
|
29.2.2 On-Chip-Based DNA Extraction |
|
|
512 | (1) |
|
29.2.3 DNA Quantification |
|
|
514 | (1) |
|
29.3 Short Tandem Repeat Markers and Commercial Kits |
|
|
515 | (1) |
|
29.3.1 STR Markers Used in Forensic DNA Testing |
|
|
515 | (1) |
|
29.3.2 Commercial Autosomal and Y-STR STR Kits |
|
|
516 | (1) |
|
29.4 Amplification of STR Loci |
|
|
517 | (1) |
|
29.4.1 Off-Chip-Based STR Amplification |
|
|
517 | (1) |
|
29.4.2 On-Chip-Based STR Amplification |
|
|
518 | (1) |
|
29.5 Capillary Electrophoretic Separation of STR Amplicons |
|
|
519 | (1) |
|
29.5.1 Off-Chip-Based Capillary Electrophoretic Separation of STR Amplicons |
|
|
519 | (1) |
|
29.5.2 On-Chip-Based Capillary Electrophoretic Separation of STR Amplicons |
|
|
521 | (2) |
|
29.6 Total Integrated Forensic STR Typing System |
|
|
523 | (1) |
|
29.6.1 Commercialized Total STR Analysis System |
|
|
523 | (1) |
|
29.6.2 A Fully Integrated Microdevice for STR Typing |
|
|
524 | (1) |
|
|
525 | (1) |
|
|
526 | (5) |
|
30 DNA Microarray-Based Technologies to Genotype Single Nucleotide Polymorphisms |
|
|
531 | (26) |
|
|
|
|
|
|
|
30.1 Allele-Specific Oligonucleotide Competitive Hybridization (ASOCH) |
|
|
532 | (1) |
|
|
532 | (1) |
|
|
532 | (1) |
|
30.1.3 Key Issues and Limitations |
|
|
533 | (1) |
|
|
534 | (1) |
|
|
534 | (1) |
|
30.2.2 Ligation-Based Method |
|
|
536 | (1) |
|
|
538 | (1) |
|
30.2.4 SSS Cleavage Reaction-Based Method |
|
|
540 | (2) |
|
30.3 Universal Amplification-Based Technology |
|
|
542 | (1) |
|
|
542 | (1) |
|
|
545 | (1) |
|
|
546 | (1) |
|
|
548 | (1) |
|
30.4 Bead Array Platform-Based SNP Genotyping |
|
|
549 | (1) |
|
|
549 | (1) |
|
|
550 | (1) |
|
|
551 | (1) |
|
|
552 | (5) |
|
31 Advanced Applications of Nanoscale Measuring System for Biosensors |
|
|
557 | (22) |
|
|
|
|
557 | (1) |
|
31.1 Nanoscale Gravimetric Measuring System for Chiral Recognition |
|
|
558 | (1) |
|
31.1.1 Principle of Quartz Crystal Microbalance |
|
|
559 | (1) |
|
31.1.2 Measuring Setup for Nanogram Order Chirality Detection |
|
|
560 | (1) |
|
31.1.3 Immobilization of Chiral Selector on QCM Surface |
|
|
560 | (1) |
|
|
561 | (1) |
|
31.1.4.1 Chiral Recognition by the L-Phe-Modified QCM in the Gas Phase |
|
|
561 | (1) |
|
31.1.4.2 Chiral Recognition by L-MA Derivative-Modified QCM Sensor in the Liquid Phase |
|
|
562 | (1) |
|
31.1.4.3 Chiral Recognition Analysis Using F-R Diagram Model |
|
|
563 | (1) |
|
31.1.4.4 Affinity Force Analysis by L-Phe-Modified Probe Tip |
|
|
563 | (1) |
|
31.2 Nanoscale Measuring System Using Two-Photon-Adsorbed Photopolymerization for Biosensors |
|
|
564 | (1) |
|
31.2.1 Principle of TPAP and its Application as an AFM Imaging Tool |
|
|
564 | (1) |
|
|
565 | (1) |
|
31.2.2.1 Hydrophobic Polymeric Tips for Imaging |
|
|
565 | (2) |
|
31.3 Nanoscale Measuring Systems Using AFM for Biosensors |
|
|
567 | (1) |
|
|
568 | (1) |
|
31.3.2 Experimental Scheme and Procedure |
|
|
568 | (1) |
|
31.3.2.1 Measuring Cu Ion-Binding Force between Histidine Molecules |
|
|
568 | (1) |
|
31.3.2.2 Utilizing Peptide Probes for Measuring Protein-Protein Interaction Force |
|
|
569 | (1) |
|
31.3.2.3 Actin Antibody-Modified Microsphere Probe |
|
|
570 | (1) |
|
|
570 | (1) |
|
31.3.3.1 Evaluation of Interaction between Histidine-Binding Cu2+ Ion and Histidine by AFM |
|
|
570 | (1) |
|
31.3.3.2 Comparison of the Force Curve between the Peptide Probe and Cofilin Protein to Actin |
|
|
571 | (1) |
|
31.3.3.3 Interaction Force in the Large Area between Actin-Modified Surface and Actin Antibody-Modified Microsphere Probe |
|
|
572 | (1) |
|
31.4 Nanoscale Measuring Systems with Nanoscale Motion Detection |
|
|
573 | (1) |
|
31.4.1 Principles of AC Electric Field |
|
|
573 | (1) |
|
31.4.2 Novel AC Microelectrophoresis in a Microflow Channel |
|
|
574 | (1) |
|
31.4.3 Preparation of Biofunctional Microspheres |
|
|
574 | (1) |
|
31.4.3.1 Preparation of IgG- and Biotin-IgG-Modified Microspheres |
|
|
574 | (1) |
|
31.4.3.2 Preparation of Profilin-Modified Microspheres with or Without Actin |
|
|
575 | (1) |
|
31.4.3.3 Preparation of Biotin-IgG and IgG Beads Mixed Samples With or Without Say |
|
|
575 | (1) |
|
|
576 | (1) |
|
31.4.4.1 Affinity Evaluation of Proteins to Protein-Modified Microspheres |
|
|
576 | (1) |
|
|
577 | (2) |
|
32 Biosynthesis and Applications of Silver Nanoparticles |
|
|
579 | (12) |
|
|
|
Concise Definition of Subject |
|
|
579 | (1) |
|
|
579 | (3) |
|
32.2 Silver Nanoparticles |
|
|
582 | (1) |
|
32.3 Plants in Nanoparticle Synthesis |
|
|
582 | (1) |
|
32.4 Parameters Affecting Synthesis of AgNPs |
|
|
583 | (1) |
|
|
583 | (1) |
|
32.4.2 Reaction Time, Precursor to Plant Extract Ratio, and Reaction Rate |
|
|
583 | (1) |
|
32.4.3 Effect of Temperature |
|
|
584 | (1) |
|
32.5 Mechanism of AgNP Synthesis |
|
|
584 | (1) |
|
32.6 Applications of AgNPs |
|
|
585 | (1) |
|
|
585 | (1) |
|
|
586 | (5) |
|
Part VI Biomedical Engineering and Biopharmaceuticals |
|
|
591 | (122) |
|
33 Smart Drug Delivery Devices and Implants |
|
|
593 | (14) |
|
|
|
|
|
|
|
|
|
|
|
|
|
593 | (1) |
|
33.2 External Drug Delivery Devices |
|
|
594 | (1) |
|
33.2.1 Microneedle Drug Delivery Devices |
|
|
594 | (1) |
|
33.2.2 Drug-Eluting Contact Lenses |
|
|
595 | (1) |
|
33.2.3 Wearable Drug Delivery Devices |
|
|
595 | (2) |
|
33.3 Internal Drug Delivery Implants |
|
|
597 | (1) |
|
33.3.1 Drug-Eluting Stent |
|
|
597 | (1) |
|
33.3.2 Programmable Drug Delivery Implants |
|
|
598 | (1) |
|
33.3.3 Intelligent Drug Delivery Implant |
|
|
599 | (1) |
|
33.4 Image-Guided Drug Delivery Systems |
|
|
600 | (2) |
|
33.5 Summary and Perspectives |
|
|
602 | (1) |
|
|
602 | (1) |
|
|
603 | (4) |
|
34 Controlled Delivery Systems of Protein and Peptide Therapeutics |
|
|
607 | (10) |
|
|
|
|
|
|
|
|
|
607 | (1) |
|
34.2 Drug Delivery Systems for Protein and Peptide Therapeutics |
|
|
608 | (1) |
|
34.2.1 Polymer-Conjugated Drug Delivery Systems |
|
|
609 | (1) |
|
34.2.1.1 PEGylated System |
|
|
609 | (1) |
|
34.2.1.2 Hyaluronate-Conjugated System |
|
|
609 | (1) |
|
34.2.2 Drug Depot Systems |
|
|
609 | (1) |
|
34.2.2.1 Polymeric Micro/Nanoparticle Depot System |
|
|
609 | (1) |
|
34.2.2.2 Hydrogel Depot System |
|
|
610 | (1) |
|
34.2.3 Nanoparticle-Based Systems |
|
|
611 | (1) |
|
34.2.3.1 Gold Nanoparticle System |
|
|
611 | (1) |
|
34.2.3.2 Magnetic Nanoparticle System |
|
|
612 | (1) |
|
34.2.4 Targeted Drug Delivery Systems |
|
|
612 | (1) |
|
34.2.4.1 Antibody-Based Target-Specific Drug Delivery |
|
|
612 | (1) |
|
34.2.4.2 Peptide-Based Target-Specific Drug Delivery |
|
|
613 | (1) |
|
34.3 Clinical Development of Protein and Peptide Delivery Systems |
|
|
613 | (1) |
|
34.4 Summary and Perspectives |
|
|
614 | (1) |
|
|
615 | (2) |
|
35 Cell Delivery Systems Using Biomaterials |
|
|
617 | (14) |
|
|
|
35.1 Introduction to Cell-Based Therapeutics |
|
|
617 | (1) |
|
35.2 Biomaterials as Cell Delivery Vehicles |
|
|
617 | (1) |
|
35.3 Cell Delivery Strategies |
|
|
618 | (1) |
|
35.3.1 Surface Modification |
|
|
618 | (1) |
|
35.3.1.1 Camouflage of Surface Antigens |
|
|
618 | (1) |
|
35.3.1.2 Prevention of Immediate Blood-Mediated Inflammatory Reaction |
|
|
619 | (1) |
|
35.3.1.3 Protection of Cells against Physical Stress |
|
|
620 | (1) |
|
35.3.1.4 Mimicking the Cell Microenvironment |
|
|
620 | (1) |
|
35.3.2 Scaffold-Based Cell Delivery |
|
|
620 | (1) |
|
35.3.2.1 Scaffold in Pancreatic Islets Delivery |
|
|
621 | (1) |
|
35.3.2.2 Scaffold in Stem Cell Delivery |
|
|
622 | (1) |
|
35.3.3 Hydrogel-Based Cell Delivery |
|
|
623 | (1) |
|
35.3.3.1 Hydrogel in Pancreatic Islets Delivery |
|
|
623 | (1) |
|
35.3.3.2 Hydrogel in Stem Cells Delivery |
|
|
625 | (1) |
|
35.4 Conclusion and Future Perspective |
|
|
626 | (1) |
|
|
626 | (5) |
|
36 Bioengineered Cell-Derived Vesicles as Drug Delivery Carriers |
|
|
631 | (14) |
|
|
|
|
631 | (1) |
|
36.2 Prokaryotic Cell-Derived Nanocarriers |
|
|
632 | (1) |
|
36.2.1 Bacterial Minicells as Drug Carrier |
|
|
632 | (1) |
|
36.2.2 Bioengineered Bacterial Outer Membrane Vesicles for Cancer Targeting and Drug Delivery |
|
|
632 | (1) |
|
36.3 Eukaryotic Cell-Derived Nanocarriers |
|
|
633 | (1) |
|
36.3.1 Bioengineered Yeast for Development of Nanocarriers |
|
|
633 | (1) |
|
36.3.2 Bioengineered Extracellular Vesicles for the Development of a Drug Delivery Platform |
|
|
634 | (4) |
|
36.4 Cell Membrane-Camouflaged Nanoparticles |
|
|
638 | (1) |
|
36.4.1 Erythrocyte Membrane-Coated Nanocarriers |
|
|
638 | (1) |
|
36.4.2 Leukocyte Membrane-Camouflaged Nanoparticles |
|
|
639 | (1) |
|
36.4.3 Platelet Membrane-Camouflaged Nanoparticles |
|
|
639 | (1) |
|
36.4.4 Cancer Cell Membrane-Camouflaged Nanoparticles |
|
|
640 | (1) |
|
|
641 | (1) |
|
|
641 | (1) |
|
|
641 | (4) |
|
37 Advanced Genetic Fusion Techniques for Improving the Pharmacokinetic Properties of Biologics |
|
|
645 | (10) |
|
|
|
Concise Definition of the Subject |
|
|
645 | (1) |
|
|
645 | (2) |
|
37.2 Fc-Fusion Technology |
|
|
647 | (1) |
|
37.3 Albumin Fusion Technology |
|
|
648 | (2) |
|
37.4 Transferrin Fusion Technology |
|
|
650 | (1) |
|
37.5 CTP Fusion Technology |
|
|
651 | (1) |
|
|
652 | (1) |
|
|
652 | (3) |
|
38 Mussel-Mimetic Biomaterials for Tissue Engineering Applications |
|
|
655 | (24) |
|
|
|
|
|
|
|
655 | (1) |
|
38.2 Synthetic and Natural Polymer-Based Mussel-Mimetic Biomaterials |
|
|
656 | (1) |
|
|
657 | (1) |
|
38.3.1 Soft Tissue Adhesives |
|
|
657 | (1) |
|
38.3.2 Hard Tissue Adhesives |
|
|
661 | (3) |
|
38.4 Biomolecule Immobilization and Drug Delivery |
|
|
664 | (5) |
|
|
669 | (1) |
|
|
670 | (1) |
|
|
670 | (9) |
|
39 Mass Production of Full-Length IgG Monoclonal Antibodies from Mammalian, Yeast, and Bacterial Hosts |
|
|
679 | (18) |
|
|
|
39.1 Mass Production of Biosimilar Monoclonal Antibodies in Mammalian Cells |
|
|
680 | (1) |
|
|
680 | (1) |
|
39.1.1.1 Process Development |
|
|
681 | (1) |
|
39.1.1.2 Large-Scale Cell Culture |
|
|
682 | (1) |
|
39.1.1.3 Large-Scale Purification |
|
|
682 | (1) |
|
39.1.1.4 Formulation and Filling Processes |
|
|
683 | (1) |
|
39.1.1.5 Physicochemical and Functional Analyses |
|
|
683 | (1) |
|
39.1.1.6 Preclinical and Clinical Evaluations |
|
|
686 | (1) |
|
39.2 Mass Production of Monoclonal Antibodies in Yeast |
|
|
686 | (1) |
|
39.3 Mass Production of Monoclonal Antibodies in Escherichia coli |
|
|
687 | (1) |
|
39.3.1 Expression of Full-Length IgG Antibodies in E. coli |
|
|
687 | (1) |
|
39.3.2 Aglycosylated Full-Length IgG Antibodies under Clinical Trials |
|
|
688 | (1) |
|
39.3.3 Engineering Aglycosylated Fc Domain for Effector Functional Antibodies in E. coli |
|
|
689 | (2) |
|
|
691 | (2) |
|
|
693 | (4) |
|
40 Recent Advances in Mass Spectrometry-Based Proteomic Methods for Discovery of Protein Biomarkers for Complex Human Diseases |
|
|
697 | (16) |
|
|
|
|
|
|
|
|
|
|
Concise Definition of Subject |
|
|
697 | (1) |
|
|
697 | (1) |
|
40.2 MS-Based Proteomic Analysis Pipeline for Discovery of Protein Biomarkers |
|
|
698 | (1) |
|
40.3 Discovery of Protein Biomarkers Using LC-MS/MS Analysis |
|
|
699 | (1) |
|
40.3.1 Reduction of Sample Complexity by Depletion and Enrichment Methods |
|
|
700 | (1) |
|
40.3.2 Improvement of Proteome Size by Sample Fractionation Methods |
|
|
702 | (1) |
|
40.4 Analysis of Proteomic Data for the Biomarker Discovery |
|
|
703 | (1) |
|
40.4.1 Functional Enrichment and Network Analyses of the DEPs |
|
|
704 | (1) |
|
40.4.2 Integrative Analysis of the DEPs with Relevant Global Datasets |
|
|
705 | (1) |
|
40.5 Verification and Validation of Biomarker Candidates |
|
|
706 | (2) |
|
|
708 | (5) |
|
Part VII Computer-Aided Bioprocess Design and Systems Biology |
|
|
713 | (90) |
|
41 Overview on Bioprocess Simulation |
|
|
715 | (8) |
|
|
|
|
|
|
715 | (1) |
|
41.2 Modeling and Design of Bioprocess |
|
|
715 | (1) |
|
41.3 Monitoring of Bioprocess |
|
|
716 | (2) |
|
41.4 Control of Bioprocess |
|
|
718 | (1) |
|
41.5 Computational Fluid Dynamics in Bioprocess Simulation |
|
|
718 | (2) |
|
|
720 | (3) |
|
42 Bioprocess Simulation and Scheduling |
|
|
723 | (38) |
|
|
|
|
|
42.1 The Purpose of Bioprocess Simulation |
|
|
723 | (2) |
|
42.2 Detailed Modeling of Single Batch Bioprocesses |
|
|
725 | (1) |
|
42.2.1 Monoclonal Antibody Example Overview |
|
|
726 | (1) |
|
42.2.2 Process Description |
|
|
729 | (1) |
|
|
729 | (1) |
|
|
729 | (1) |
|
|
730 | (1) |
|
42.2.4 Scheduling and Cycle Time Reduction |
|
|
731 | (1) |
|
42.2.5 Economic Evaluation |
|
|
733 | (1) |
|
42.2.6 Sensitivity Analysis |
|
|
736 | (3) |
|
42.3 Design and Operation of Multiproduct Facilities |
|
|
739 | (1) |
|
42.3.1 Applications of Multiproduct Plant Modeling |
|
|
740 | (1) |
|
42.3.1.1 Capacity Analysis and Strategic Planning |
|
|
740 | (1) |
|
42.3.1.2 Production Scheduling |
|
|
741 | (1) |
|
42.3.1.3 Facility Design and Debottlenecking |
|
|
741 | (1) |
|
42.3.2 Approaches to Modeling of Multiproduct Batch Plants |
|
|
742 | (1) |
|
42.3.2.1 Spreadsheet Tools |
|
|
742 | (1) |
|
42.3.2.2 Batch Process Simulation Tools |
|
|
742 | (1) |
|
42.3.2.3 Discrete-Event Simulation Tools |
|
|
742 | (1) |
|
42.3.2.4 Mathematical Optimization Tools |
|
|
743 | (1) |
|
42.3.2.5 Recipe-Based Scheduling Tools |
|
|
743 | (1) |
|
42.3.3 Capacity Analysis and Strategic Planning |
|
|
744 | (1) |
|
42.3.4 Production Scheduling |
|
|
745 | (1) |
|
42.3.4.1 Recipe Overview and Schedule Generation |
|
|
745 | (1) |
|
42.3.4.2 Accounting for Buffer Preparation and Holding |
|
|
749 | (1) |
|
42.3.4.3 Considering Labor Constraints |
|
|
751 | (1) |
|
42.3.4.4 Production Tracking and Rescheduling |
|
|
752 | (2) |
|
42.3.5 Facility Design and Debottlenecking |
|
|
754 | (1) |
|
42.3.5.1 Sizing of Utility Systems |
|
|
755 | (1) |
|
42.3.5.2 Estimating Floor Space for Mobile Units |
|
|
757 | (1) |
|
|
758 | (1) |
|
|
758 | (1) |
|
|
759 | (2) |
|
43 Metabolism-Combined Growth Model Construction and Its Application to Optimal Bioreactor Operation |
|
|
761 | (10) |
|
|
|
|
|
761 | (1) |
|
43.2 Growth Model Construction and a Diversity of Modification Methods |
|
|
762 | (3) |
|
43.3 Optimal Decision-Making System |
|
|
765 | (1) |
|
|
765 | (3) |
|
|
768 | (1) |
|
|
768 | (1) |
|
|
768 | (3) |
|
44 Software Applications for Phenotype Analysis and Strain Design of Cellular Systems |
|
|
771 | (22) |
|
|
|
|
|
771 | (1) |
|
|
772 | (1) |
|
44.3 COBRA Software Applications |
|
|
772 | (1) |
|
44.3.1 Model Reconstruction |
|
|
774 | (1) |
|
44.3.1.1 Draft Reconstruction |
|
|
777 | (1) |
|
44.3.1.2 Manual Refinement |
|
|
777 | (1) |
|
|
777 | (1) |
|
44.3.2 Phenotype Analysis |
|
|
777 | (1) |
|
44.3.2.1 Elucidating the Optimal Metabolic State |
|
|
778 | (1) |
|
44.3.2.2 Characterizing the Global Solution Space |
|
|
778 | (1) |
|
44.3.2.3 Modeling Genetic Perturbations |
|
|
778 | (1) |
|
44.3.2.4 Integrating Regulatory Information with CBM Models |
|
|
781 | (1) |
|
44.3.3 In Silico Strain Design |
|
|
781 | (1) |
|
44.3.4 Miscellaneous Features |
|
|
782 | (1) |
|
44.4 Utilizing the Potential of COBRA Software Applications Suite: A Practical Case Study |
|
|
782 | (1) |
|
|
785 | (1) |
|
|
786 | (1) |
|
|
786 | (1) |
|
44.5 Conclusions and Future Perspectives |
|
|
787 | (1) |
|
|
788 | (5) |
|
45 Metabolic Network Modeling for Computer-Aided Design of Microbial Interactions |
|
|
793 | (10) |
|
|
|
|
|
|
|
|
|
45.1 Biological Computer-Aided Design of Interactions |
|
|
793 | (2) |
|
45.2 Community Metabolic Network Reconstruction |
|
|
795 | (1) |
|
45.3 Prediction of Interactions Using Metabolic Networks |
|
|
796 | (1) |
|
45.3.1 Interspecies Interaction Scoring |
|
|
796 | (1) |
|
45.3.2 Steady-State Flux Modeling |
|
|
797 | (1) |
|
45.3.3 Modeling Dynamic Interactions |
|
|
798 | (1) |
|
|
798 | (1) |
|
|
798 | (1) |
|
|
799 | (1) |
|
|
799 | (4) |
|
|
803 | |