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E-raamat: Application of Computational Techniques in Pharmacy and Medicine

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The proposed volume provides both fundamental and detailed information about the computational and computational-experimental studies which improve our knowledge of how leaving matter functions, the different properties of drugs (including the calculation and the design of new ones), and the creation of completely new ways of treating numerical diseases. Whenever it is possible, the interplay between theory and experiment is provided. The book features computational techniques such as quantum-chemical and molecular dynamic approaches and quantitative structure–activity relationships.
The initial chapters describe the state-of-the art research on the computational investigations in molecular biology, molecular pharmacy, and molecular medicine performed with the use of pure quantum-chemical techniques. The central part of the book illustrates the status of computational techniques that utilize hybrid, so called QM/MM approximations as well as the results of the QSAR studies which now are the most popular in predicting drugs’ efficiency. The last chapters describe combined computational and experimental investigations.
1 Hybrid QM/MM Methods: Treating Electronic Phenomena in Very Large Molecular Systems
1(20)
Antonio Monari
Xavier Assfeld
2 Structure, Thermodynamics and Energetics of Drug-DNA Interactions: Computer Modeling and Experiment
21(38)
Maxim P. Evstigneev
Anna V. Shestopalova
3 Formation of DNA Lesions, its Prevention and Repair
59(36)
Nihar R. Jena
Neha Agnihotri
Phool C. Mishra
4 DNA Dependent DNA Polymerases as Targets for Low-Weight Molecular Inhibitors: State of Art and Prospects of Rational Design
95(42)
Alexey Yu. Nyporko
5 Molecular Structures, Relative Stability, and Proton Affinities of Nucleotides: Broad View and Novel Findings
137(44)
Tetiana A. Zubatiuk
Gennady V. Palamarchuk
Oleg V. Shishkin
Leonid Gorb
Jerzy Leszczynski
6 Quantum Chemical Approaches in Modeling the Structure of DNA Quadruplexes and Their Interaction with Metal Ions and Small Molecules
181(26)
Mykola Ilchenko
Igor Dubey
7 Density Functional Theory Calculations of Enzyme--Inhibitor Interactions in Medicinal Chemistry and Drug Design
207(34)
Alexander B. Rozhenko
8 Molecular Dynamics Simulations of Lipid Bilayers with Incorporated Peptides
241(30)
Milan Melichercik
Tibor Hianik
Jan Urban
9 Polyphenol Glycosides as Potential Remedies in Kidney Stones Therapy. Experimental Research Supported by Computational Studies
271(24)
D. Toczek
E. Klepacz
S. Roszak
R. Gancarz
10 Quantum-Chemical Investigation of Epoxidic Compounds Transformation. Application for In Vitro and In Vivo Processes Modeling
295(30)
Sergiy Okovytyy
11 Computational Toxicology in Drug Discovery: Opportunities and Limitations
325(44)
Alexey Zakharov
Alexey Lagunin
12 Consensus Drug Design Using It Microcosm
369(64)
Pavel M. Vassiliev
Alexander A. Spasov
Vadim A. Kosolapov
Aida F. Kucheryavenko
Nataliya A. Gurova
Vera A. Anisimova
13 Continuous Molecular Fields Approach Applied to Structure-Activity Modeling
433(28)
Igor I. Baskin
Nelly I. Zhokhova
14 Quantitative Structure-Property Relationship Analysis of Drugs' Pharmacokinetics Within the Framework of Biopharmaceutics Classification System Using Simplex Representation of Molecular Structure
461(40)
N. Ya. Golovenko
I. Yu. Borisyuk
M. A. Kulinskiy
P. G. Polishchuk
E. N. Muratov
V. E. Kuz'min
15 (How to) Profit from Molecular Dynamics-based Ensemble Docking
501(38)
Susanne von Grafenstein
Julian E. Fuchs
Klaus R. Liedl
16 Cheminformatics: At the Crossroad of Eras
539(8)
Denis Fourches
Index 547