| Biography |
|
xiii | |
| Abbreviations |
|
xv | |
| Foreword |
|
xvii | |
| Acknowledgments |
|
xix | |
|
|
|
1 | (12) |
|
|
|
3 | (4) |
|
1.1.1 Definition of CG-CNVs versus MG-CNVs |
|
|
4 | (1) |
|
1.1.2 CG-CNVs without Clinical Consequences |
|
|
5 | (1) |
|
1.1.2.1 Heterochromatic CG-CNVs |
|
|
5 | (1) |
|
1.1.2.2 Euchromatic CG-CNVs |
|
|
5 | (2) |
|
1.2 Frequency and Chromosomal Origin of Cytogenetically Visible Copy Number Variants (CG-CNVs) without Clinical Consequences |
|
|
7 | (1) |
|
1.3 Practical Meaning of CG-CNVs in Diagnostics and Research |
|
|
8 | (2) |
|
|
|
8 | (2) |
|
1.4 Submicroscopic CNVs (MG-CNVs) |
|
|
10 | (3) |
|
2 CG-CNVs: What is the Norm? |
|
|
13 | (12) |
|
2.1 Acrocentric Chromosomes' Short Arm Variants |
|
|
13 | (1) |
|
2.2 Variants of the Centromeric Regions |
|
|
14 | (4) |
|
2.3 Variants of Noncentromeric Heterochromatin |
|
|
18 | (1) |
|
2.4 Unbalanced Chromosome Abnormalities (UBCAs) without Clinical Consequences |
|
|
18 | (3) |
|
2.5 Small Supernumerary Marker Chromosomes (sSMCs) |
|
|
21 | (1) |
|
2.6 Euchromatic Variants (EVs) |
|
|
21 | (2) |
|
2.7 Gonosomal Derived Chromatin |
|
|
23 | (1) |
|
2.7.1 Gonosomal Derived Heterochromatin |
|
|
23 | (1) |
|
2.7.2 Gonosomal Derived Euchromatin |
|
|
23 | (1) |
|
|
|
23 | (1) |
|
|
|
23 | (1) |
|
|
|
24 | (1) |
|
|
|
25 | (4) |
|
|
|
25 | (1) |
|
3.1.1 Familial CG-CNVs and Infertility |
|
|
26 | (1) |
|
|
|
26 | (2) |
|
|
|
27 | (1) |
|
|
|
28 | (1) |
|
|
|
29 | (8) |
|
4.1 Acrocentric Chromosomes' Short-Arm Variants |
|
|
29 | (2) |
|
4.2 Variants of the Centromeric Regions |
|
|
31 | (2) |
|
4.3 Variants of Noncentromeric Heterochromatin |
|
|
33 | (1) |
|
4.4 Unbalanced Chromosome Abnormalities (UBCAs) |
|
|
34 | (1) |
|
4.5 Small Supernumerary Marker Chromosomes (sSMCs) |
|
|
34 | (1) |
|
4.6 Euchromatic Variants (EVs) |
|
|
35 | (1) |
|
4.7 Gonosomal-Derived Chromatin |
|
|
35 | (1) |
|
|
|
35 | (2) |
|
|
|
37 | (84) |
|
5.1 Heterochromatic CG-CNVs |
|
|
37 | (48) |
|
5.1.1 Acrocentric Chromosomes' Short Arms |
|
|
37 | (2) |
|
5.1.1.1 Enlargement of Acrocentric Chromosomes' Short Arms |
|
|
39 | (1) |
|
5.1.1.1.1 Amplification of acrocentric short arm material |
|
|
40 | (4) |
|
5.1.1.1.2 Addition of heterochromatic material to the acrocentric short arms |
|
|
44 | (1) |
|
5.1.1.1.2.1 Unbalanced translocations between acrocentric short arms |
|
|
45 | (1) |
|
5.1.1.1.2.2 Unbalanced translocations involving acrocentric short arms and other heterochromatic material |
|
|
46 | (2) |
|
5.1.1.1.3 Addition of acrocentrics short arms to nonacrocentric q-arms or p-arms |
|
|
48 | (1) |
|
5.1.1.1.4 Insertion of acrocentric short arms to other chromosomes |
|
|
49 | (2) |
|
5.1.1.2 Loss of Material of Acrocentric Chromosomes' Short Arms |
|
|
51 | (1) |
|
5.1.1.3 Altered Acrocentric p-arms as Hints on Cryptic Unbalanced Aberrations |
|
|
52 | (4) |
|
5.1.2 Pericentric Regions of All Chromosomes |
|
|
56 | (2) |
|
|
|
58 | (1) |
|
|
|
59 | (1) |
|
|
|
60 | (1) |
|
|
|
61 | (1) |
|
|
|
62 | (1) |
|
|
|
63 | (1) |
|
|
|
64 | (1) |
|
|
|
65 | (1) |
|
|
|
65 | (3) |
|
|
|
68 | (1) |
|
|
|
69 | (1) |
|
|
|
69 | (1) |
|
|
|
70 | (1) |
|
|
|
71 | (1) |
|
|
|
72 | (1) |
|
|
|
73 | (1) |
|
|
|
74 | (1) |
|
|
|
75 | (1) |
|
|
|
76 | (1) |
|
|
|
77 | (1) |
|
|
|
77 | (1) |
|
|
|
78 | (1) |
|
|
|
79 | (1) |
|
|
|
80 | (1) |
|
5.1.2.25 Insertion of Pericentric Material into Other Chromosomes |
|
|
80 | (1) |
|
5.1.2.26 MG-CNVs of the pericentric regions |
|
|
81 | (1) |
|
5.1.3 Gonosomal-Derived Heterochromatin |
|
|
82 | (1) |
|
5.1.3.1 Size Variations of Yq12 |
|
|
82 | (1) |
|
5.1.3.2 Addition of Yq12 to Other Chromosomal Ends |
|
|
83 | (1) |
|
5.1.3.3 Insertion of Yq12 |
|
|
83 | (1) |
|
|
|
83 | (1) |
|
5.1.4 Heterochromatic sSMC |
|
|
83 | (2) |
|
|
|
85 | (18) |
|
5.2.1 Euchromatic Gain without Clinical Consequences |
|
|
86 | (1) |
|
|
|
86 | (1) |
|
|
|
86 | (2) |
|
|
|
88 | (1) |
|
|
|
89 | (1) |
|
|
|
89 | (2) |
|
|
|
91 | (1) |
|
|
|
92 | (1) |
|
|
|
93 | (1) |
|
|
|
94 | (1) |
|
|
|
95 | (1) |
|
|
|
95 | (1) |
|
|
|
96 | (1) |
|
|
|
96 | (2) |
|
|
|
98 | (1) |
|
|
|
98 | (1) |
|
|
|
98 | (1) |
|
|
|
99 | (1) |
|
|
|
99 | (1) |
|
|
|
100 | (1) |
|
|
|
100 | (1) |
|
|
|
100 | (1) |
|
|
|
101 | (1) |
|
|
|
102 | (1) |
|
|
|
102 | (1) |
|
5.2.2 Euchromatic Loss without Clinical Consequences |
|
|
103 | (1) |
|
|
|
103 | (13) |
|
|
|
103 | (1) |
|
|
|
103 | (2) |
|
|
|
105 | (1) |
|
|
|
106 | (1) |
|
|
|
107 | (1) |
|
|
|
107 | (1) |
|
|
|
107 | (1) |
|
|
|
108 | (1) |
|
|
|
109 | (1) |
|
|
|
109 | (1) |
|
|
|
110 | (1) |
|
|
|
110 | (1) |
|
|
|
110 | (2) |
|
|
|
112 | (1) |
|
|
|
112 | (1) |
|
|
|
112 | (1) |
|
|
|
113 | (1) |
|
|
|
113 | (1) |
|
|
|
113 | (1) |
|
|
|
114 | (1) |
|
|
|
115 | (1) |
|
|
|
115 | (1) |
|
|
|
115 | (1) |
|
5.2.3 X-Autosome Translocations |
|
|
115 | (1) |
|
5.3 Submicroscopic CNVs (MG-CNVs) |
|
|
116 | (5) |
|
|
|
116 | (1) |
|
5.3.2 Pathologic Variants |
|
|
116 | (5) |
|
6 CG-CNVs in Genetic Diagnostics and Counseling |
|
|
121 | (6) |
|
6.1 CG-CNVs in Diagnostics |
|
|
121 | (3) |
|
6.1.1 First Steps: Banding Cytogenetics |
|
|
121 | (1) |
|
6.1.1.1 Other Cytogenetic Approaches |
|
|
121 | (1) |
|
6.1.2 Molecular Cytogenetics |
|
|
122 | (1) |
|
|
|
122 | (1) |
|
6.1.4 How to Characterize CG-CNVs and MG-CNVs in Diagnostics |
|
|
123 | (1) |
|
6.1.4.1 Heterochromatic CG-CNVs |
|
|
123 | (1) |
|
6.1.4.2 Euchromatic CG-CNVs |
|
|
123 | (1) |
|
|
|
124 | (1) |
|
6.2 CG-CNVs and MG-CNVs in Reporting and Genetic Counseling |
|
|
124 | (3) |
|
6.2.1 Heterochromatic CG-CNVs in Reporting and Genetic Counseling |
|
|
124 | (1) |
|
6.2.2 Euchromatic CG-CNVs and MG-CNVs in Reporting and Genetic Counseling |
|
|
125 | (2) |
|
|
|
127 | (4) |
|
|
|
127 | (1) |
|
|
|
128 | (3) |
| Appendix: Summary of CG-CNVs |
|
131 | (20) |
|
|
| References |
|
151 | (38) |
| Index |
|
189 | |