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E-raamat: Contemporary High Performance Computing: From Petascale toward Exascale

Edited by (Oak Ridge National Laboratory, Tennessee, USA)
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"Preface We are pleased to present you with this collection of material that captures a snapshot of the rich history of practice in Contemporary High Performance Computing. As evidenced in the chapters of this book, High Performance Computing continues to flourish, both in industry and research, both domestically and internationally. While much of the focus of HPC is on the hardware architectures, a significant ecosystem is responsible for this success. Why I edited this book My goal with this book has been to highlight significant systems and facilities in high performance computing. Early on, my main focus was proposed to be on the architectural design of important and successful HPC systems. However, I realized that HPC is about more than just hardware: it is an ecosystem that includes software, applications, facilities, educators, software developers, scientists, administrators, sponsors, and many other factors. This book is a snapshot of these contemporary HPC ecosystems, which are typically punctuated with a site's flagship system. Broadly speaking, HPC is growing internationally, so I invited contributions from a broad base of organizations including the USA, China, Japan, Russia, Germany, and Switzerland. My excitement about this book grew as I started inviting authors to contribute: everyone said 'yes!' In fact, due to the limitations on hardback publishing, we had to limit the number of chapters that we could include in this edition; however, change in HPC is accelerating, so a second edition of this book may be warranted. As I explain in the introduction, the rate of change in HPC is accelerating"--

"While there are many important systems in high performance computing (HPC) available today, the HPC community lacks a single reference on the key aspects of the systems, such as application workloads, procurement timeline, and facilities specification. This book provides the first comprehensive resource to describe these systems and their hardware and software architectures. The first part of the book explores current trends in HPC. The second part presents detailed descriptions of deployed systems thatspan a number of architectures, application workloads, facilities, and sponsors"--

Arvustused

"Jeffrey Vetter has organized and edited a definitive state-of-the-practice volume on high-end high-performance computing (HPC), as it exists right now. What is provided is an insiders view of major HPC ecosystems, in a world where petascale computing is the reality. Consistent editing and parallel presentations contribute to the usefulness of this volume. Numerous figures and tables complement the text an important reference for the high-end HPC community." Computing Reviews, July 2013

List of Figures
xi
List of Tables
xxi
Preface xxv
Editor xxvii
I Trends in HPC
1(42)
1 Contemporary High Performance Computing
3(10)
Jeffrey S. Vetter
2 HPC Challenge: Design, History, and Implementation Highlights
13(18)
Jack Dongarra
Piotr Luszczek
3 The Green500 List: A Look Back to Look Forward
31(12)
Wu-chun Feng
Kirk Cameron
Thomas Scogland
II Contemporary HPC
43(530)
4 Tera 100
45(30)
Mickael Amiet
Patrick Carribault
Elisabeth Charon
Guillaume Colin de Verdiere
Philippe Deniel
Gilles Grospellier
Guenole Harel
Francois Jollet
Jacques-Charles Lafoucriere
Jacques-Bernard Lekien
Stephane Mathieu
Marc Perache
Jean-Christophe Weill
Gilles Wiber
5 The Mole-8.5 Supercomputing System
75(24)
Xiaowei Wang
Wei Ge
6 Supercomputing in the DoD High Performance Computing Modernization Program
99(24)
John E. West
Roy L. Campbell
Larry P. Davis
7 Keeneland: Computational Science Using Heterogeneous GPU Computing
123(30)
Jeffrey S. Vetter
Richard Glassbrook
Karsten Schwan
Sudhakar Yalamanchili
Mitch Horton
Ada Gavrilovska
Magda Slawinska
Jack Dongarra
Jeremy Meredith
Philip C. Roth
Kyle Spafford
Stanimire Tomov
John Wynkoop
8 Blue Gene/P: Jugene
153(36)
Norbert Attig
Jutta Docter
Wolfgang Frings
Johannes Grotendorst
Inge Gutheil
Florian Janelzko
Olaf Mextorf
Bernd Mohr
Michael Stephan
Klaus Wolkersdorfer
Lothar Wollschlager
Stefan Krieg
Thomas Lippert
9 Roadrunner: The Dawn of Accelerated Computing
189(36)
Sriram Swaminarayan
10 Blue Gene/Q: Sequoia and Mira
225(58)
William E. Allcock
Charles Bacon
Anna Maria Bailey
Raymond Bair
Ramesh Balakrishnan
Adam Bertsch
Barna Bihari
Brian Carnes
Dong Chen
George L.T. Chiu
Richard Coffey
Susan Coghlan
Paul W. Coteus
Kimberly Cupps
Erik W. Draeger
Larry Fried
Thomas W. Fox
Mark Gary
James N. Glosli
Thomas Gooding
John A. Gunnels
John C. Gyllenhaal
Jeff Hammond
Ruud A. Haring
Philip Heidelberger
Mark Hereld
Todd Inglett
Kyu-hyoun Kim
Kalyan Kumaran
Steven Langer
Amith R. Mamidala
Rose McCallen
Paul Messina
Sam Miller
Arthur A. Mirin
Vitali Morozov
Fady Najjar
Mike Nelson
Albert Nichols
Martin Ohmacht
Michael E. Papka
Fabrizio Petrini
Kyung Dong Ryu
Terri Quinn
David Richards
Katherine M. Riley
Nichols A. Romero
Andrew A. Schram
Robert Shearer
Tom Spelce
Becky Springmeyer
Fred Streitz
Bronis de Supinski
Pavlos Vranas
Robert E. Walkup
Amy Wang
Timothy J. Williams
Robert W. Wisniewski
11 "Lomonosov": Supercomputing at Moscow State University
283(26)
Victor Sadovnichy
Alexander Tikhonravov
Vladimir Voevodin
Vsevolod Opanasenko
12 Pleiades: NASA's First Petascale Supercomputer
309(30)
Rupak Biswas
William Thigpen
Robert Ciotti
Piyush Mehrotra
Chris Henze
John Parks
Bryan Biegel
Robert Hood
13 The Blue Waters Super-System for Super-Science
339(28)
Brett Bode
Michelle Butler
Thom Dunning
Torsten Hoefler
William Kramer
William Gropp
Wen-mei Hwu
14 Kraken: The First Academic Petaflop Computer
367(32)
Mark R. Fahey
Lonnie D. Crosby
Gary L. Rogers
Victor G. Hazlewood
15 Titan: 20-Petaflop Cray XK7 at Oak Ridge National Laboratory
399(22)
Arthur Bland
Wayne Jonbert
Don Maxwell
Norbert Podhorszki
Jim Rogers
Galen Shipman
Arnold Tharrington
16 Blacklight: Coherent Shared Memory for Enabling Science
421(20)
Nick Nystrom
Joel Welling
Phil Blood
Eng Lim Goh
17 Gordon: A Novel Architecture for Data Intensive Computing
441(32)
Pietro Cicotti
Michael Norman
Robert S. Sinkovits
Shawn Strande
Allan Snavely
18 Monte Rosa: Architectural Features and a Path Toward Exascale
473(26)
Sadaf R. Alam
Gilles Fourestey
Maria Grazia Giuffreda
Colin McMurtrie
19 Tianhe-1A Supercomputer: System and Application
499(26)
Xiangke Liao
Yutong Lu
Min Xie
20 TSUBAME2.0: The First Petascale Supercomputer in Japan and the Greatest Production in the World
525(32)
Satoshi Matsuoka
Takayuki Aoki
Toshio Endo
Hitoshi Sato
Shin'ichiro Takizawa
Akihiko Nomura
Kento Sato
21 HA-PACS: A Highly Accelerated Parallel Advanced System for Computational Sciences
557(16)
Taisuke Boku
Toshihiro Hanawa
Yoshinobu Kuramashi
Kohji Yoshikawa
Mitsuo Shoji
Yuetsu Kodama
Mitsuhisa Sato
Masayuki Umemura
III Clouds and Grids in HPC
573(74)
22 Magellan: A Testbed to Explore Cloud Computing for Science
575(28)
Lavanya Ramakrishnan
Iwona Sakrejda
Shane Canon
Krishna Muriki
Nicholas J. Wright
Adam Scovel
Susan Coghlan
Anping Liu
Devarshi Ghoshal
23 FutureGrid: A Reconfigurable Testbed for Cloud, HPC, and Grid Computing
603(34)
Geoffrey C. Fox
Gregor von Laszewski
Javier Diaz
Kate Keahey
Jose Fortes
Renato Figueiredo
Shava Smallen
Warren Smith
Andrew Grimshaw
24 LLGrid: Supercomputer for Sensor Processing
637(10)
Jeremy Kepner
William Arcand
Nadya Bliss
David Bestor
Chansup Byun
Matthew Hubbell
Peter Michaleas
Julie Mullen
Andrew Prout
Albert Reuther
Antonio Rosa
Charles Yee
Bibliography 647(46)
Index 693
Jeffrey S. Vetter holds a joint appointment at Oak Ridge National Laboratory (ORNL) and the Georgia Institute of Technology (Georgia Tech). At ORNL, he is a Distinguished R&D Staff member and the founding Group Leader of the Future Technologies Group in the Computer Science and Mathematics Division. At Georgia Tech, Dr. Vetter is a professor in the Computational Science and Engineering School of the College of Computing, the principal investigator for the NSF Track 2D Experimental Computing Facility (Keeneland), and the director of the NVIDIA CUDA Center of Excellence. He earned a Ph.D. in computer science from Georgia Tech. A Senior Member of the IEEE and a Distinguished Scientist member of the ACM, Dr. Vetter has published over 110 peer-reviewed papers and has been a recipient of the ACM Gordon Bell Prize. His current research explores the role of emerging technologies in high performance computing.