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Section I Visible and Infrared |
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1 Visible and Infrared Overview |
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3 | (26) |
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3 | (9) |
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1.1.1 Visible and Infrared Imaging Systems |
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4 | (5) |
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9 | (3) |
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1.2 Physical and Technical Principles |
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12 | (5) |
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1.2.1 Imaging Sensor Dimensions |
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12 | (1) |
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1.2.2 Spectral Characteristics |
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13 | (2) |
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1.2.3 Photography (Film and Digital) |
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15 | (1) |
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1.2.4 Multispectral Imaging Systems |
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16 | (1) |
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1.2.5 Hyperspectral Imaging Systems |
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17 | (1) |
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17 | (5) |
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1.3.1 Image Preprocessing |
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17 | (2) |
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19 | (1) |
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20 | (1) |
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1.3.4 Biophysical or Continuous Variable Mapping |
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21 | (1) |
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22 | (7) |
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1.4.1 Technological Advances |
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23 | (1) |
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1.4.2 Scientific Advances |
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24 | (1) |
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25 | (1) |
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25 | (4) |
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2 Photography Applications |
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29 | (22) |
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29 | (2) |
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2.2 Photography of Coral Reefs |
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31 | (1) |
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2.3 Photography Analysis and Classification Techniques |
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32 | (4) |
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2.4 Example Applications of Photography |
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36 | (10) |
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2.4.1 Baseline Spatial Mapping |
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37 | (3) |
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2.4.2 Time Series Analysis |
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40 | (2) |
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2.4.3 Astronaut Photography as a Secondary Data Source |
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42 | (1) |
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2.4.4 Suspended Sediment Studies |
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43 | (3) |
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2.5 Conclusions and Future Directions |
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46 | (5) |
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47 | (1) |
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47 | (4) |
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3 Multispectral Applications |
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51 | (28) |
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51 | (3) |
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3.2 Multispectral Analysis and Classification |
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54 | (9) |
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54 | (5) |
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59 | (3) |
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3.2.3 Time-Series Analysis |
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62 | (1) |
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63 | (5) |
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63 | (2) |
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65 | (1) |
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66 | (2) |
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3.4 Conclusions and Future Directions |
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68 | (11) |
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3.4.1 Integration with Other Sensor Modalities |
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69 | (1) |
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3.4.2 Integration with Field Monitoring |
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69 | (1) |
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3.4.3 Integration with Modeling |
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70 | (2) |
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3.4.4 Integration with Management |
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72 | (1) |
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72 | (1) |
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73 | (6) |
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4 Hyperspectral Applications |
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79 | (36) |
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80 | (6) |
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4.1.1 Relevance to Coral Reef Management |
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80 | (3) |
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4.1.2 Design and Operational Considerations |
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83 | (3) |
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4.2 Hyperspectral Planning and Preprocessing |
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86 | (9) |
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4.2.1 Data and Processing Requirements |
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87 | (1) |
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4.2.2 Preprocessing Considerations |
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88 | (1) |
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4.2.3 Atmospheric Correction |
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89 | (2) |
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4.2.4 Cross Track Variation and Correction |
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91 | (1) |
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4.2.5 Sunglint Correction |
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92 | (2) |
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94 | (1) |
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4.3 Hyperspectral Algorithms |
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95 | (9) |
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95 | (2) |
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4.3.2 Band-Specific Analysis |
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97 | (1) |
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98 | (1) |
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99 | (1) |
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100 | (1) |
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101 | (3) |
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104 | (11) |
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108 | (1) |
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108 | (7) |
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115 | (30) |
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116 | (1) |
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117 | (10) |
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5.2.1 Aircraft-Deployed LiDAR |
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117 | (7) |
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5.2.2 Field-Deployed LiDAR |
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124 | (2) |
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5.2.3 Cost and Application |
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126 | (1) |
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5.3 Image Products and Environmental Variables |
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127 | (9) |
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5.3.1 Bathymetric Products |
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127 | (4) |
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131 | (1) |
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132 | (1) |
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5.3.4 Surrounding Environment |
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133 | (3) |
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5.4 Processing and Validation Requirements |
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136 | (9) |
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138 | (1) |
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138 | (7) |
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145 | (30) |
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146 | (1) |
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6.2 Example LiDAR Applications |
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146 | (20) |
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6.2.1 Navigational Charting |
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147 | (2) |
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6.2.2 Benthic Habitat Mapping |
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149 | (2) |
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6.2.3 Morphology and Topographic Complexity |
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151 | (4) |
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6.2.4 Marine Protected Area Planning |
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155 | (3) |
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158 | (3) |
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6.2.6 Coastal Sediment Management |
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161 | (1) |
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6.2.7 Risk Assessment and Environmental Change |
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162 | (4) |
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6.3 Future Directions in LiDAR |
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166 | (2) |
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6.3.1 Integration with Other Sensors |
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166 | (1) |
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6.3.2 Deployment on Different Platforms |
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167 | (1) |
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168 | (7) |
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169 | (1) |
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169 | (6) |
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7 Integrated LiDAR and Hyperspectral |
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175 | (20) |
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175 | (2) |
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7.2 LiDAR/Hyperspectral Processing |
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177 | (6) |
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7.2.1 SIT Data Fusion Model |
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177 | (1) |
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7.2.2 LiDAR-Derived Parameters |
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178 | (3) |
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7.2.3 Hyperspectral Color Balancing |
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181 | (1) |
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7.2.4 Constrained Optimization Modeling |
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182 | (1) |
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7.3 Applications of LiDAR/Hyperspectral Fusion |
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183 | (5) |
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7.3.1 Decision-Tree Classification |
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184 | (2) |
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7.3.2 Dempster-Shafer Method |
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186 | (2) |
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7.4 Summary and Discussion |
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188 | (7) |
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189 | (1) |
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190 | (5) |
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8 Acoustic Methods Overview |
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195 | (26) |
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195 | (2) |
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8.2 Physical and Technical Principles |
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197 | (10) |
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197 | (1) |
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198 | (4) |
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8.2.3 Sending and Receiving the Signal |
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202 | (3) |
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8.2.4 Processing Requirements |
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205 | (2) |
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8.3 Applications of Acoustics |
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207 | (11) |
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8.3.1 Single Beam Bathymetry |
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208 | (1) |
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208 | (3) |
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211 | (3) |
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8.3.4 Acoustic Doppler Current Profiling |
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214 | (1) |
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8.3.5 Fisheries Acoustics |
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215 | (3) |
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218 | (3) |
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219 | (1) |
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219 | (2) |
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221 | (32) |
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222 | (5) |
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9.1.1 Relevance to Coral Reef Management |
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222 | (1) |
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9.1.2 Role of Acoustics in Benthic Habitat Mapping |
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222 | (1) |
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9.1.3 Acoustic Remote Sensing Platforms |
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223 | (2) |
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9.1.4 Selecting an Acoustic System |
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225 | (2) |
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227 | (19) |
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9.2.1 Single-Beam Acoustic Seabed Classification |
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227 | (11) |
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9.2.2 Multi-Beam Echo Sounder Application |
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238 | (2) |
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9.2.3 Phase Differencing Bathymetric Sonar |
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240 | (2) |
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9.2.4 Split-Beam Application |
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242 | (4) |
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9.3 State of the Science and Future Directions |
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246 | (7) |
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249 | (1) |
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249 | (4) |
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10 Deep Acoustic Applications |
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253 | (32) |
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254 | (2) |
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10.2 History of Mapping Cold-Water Coral Habitats |
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256 | (4) |
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10.3 Cold-Water Coral Mapping Example |
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260 | (18) |
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10.3.1 Sonar and AUV Configuration |
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260 | (1) |
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10.3.2 Survey Design and Data Analysis |
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261 | (3) |
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10.3.3 Cold-Water Coral Mound Characterization |
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264 | (5) |
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10.3.4 Mound Morphometrics |
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269 | (1) |
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10.3.5 Habitat Classification Map |
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269 | (9) |
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10.4 Conclusions and Recommendations |
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278 | (7) |
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280 | (1) |
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280 | (5) |
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Section IV Thermal and Radar |
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11 Thermal and Radar Overview |
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285 | (28) |
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286 | (1) |
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286 | (12) |
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11.2.1 Thermal Physical Principles |
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286 | (5) |
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11.2.2 Acquisition Logistics |
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291 | (3) |
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11.2.3 History of Thermal Monitoring |
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294 | (3) |
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11.2.4 Thermal Processing Requirements |
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297 | (1) |
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11.2.5 Thermal Validation |
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298 | (1) |
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298 | (12) |
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11.3.1 Radar Physical Principles |
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298 | (5) |
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303 | (5) |
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11.3.3 Radar Processing Requirements |
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308 | (1) |
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309 | (1) |
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310 | (3) |
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310 | (1) |
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311 | (2) |
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313 | (28) |
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314 | (4) |
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12.1.1 Infrared and Microwave Sensors |
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314 | (1) |
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12.1.2 Measurement Accuracies |
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315 | (2) |
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317 | (1) |
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12.2 Thermal Data Products and Analysis |
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318 | (9) |
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12.2.1 AVHRR Pathfinder Series |
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318 | (1) |
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12.2.2 Group for High-Resolution SST |
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319 | (1) |
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12.2.3 Quantifying Trends and Changes |
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320 | (4) |
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12.2.4 Application to Reef Management |
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324 | (3) |
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327 | (1) |
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12.3 Example Thermal Applications |
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327 | (6) |
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12.3.1 Marine Protected Area Design |
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328 | (2) |
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12.3.2 Water Quality and Coral Bleaching |
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330 | (1) |
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12.3.3 Coastal and Oceanic Upwelling |
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331 | (2) |
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333 | (8) |
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335 | (1) |
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335 | (6) |
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341 | (34) |
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342 | (1) |
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343 | (7) |
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13.2.1 Analysis and Classification Techniques |
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343 | (2) |
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345 | (2) |
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13.2.3 Example Applications |
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347 | (3) |
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13.3 VHF High Resolution Radar |
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350 | (1) |
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350 | (1) |
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13.3.2 Example Application |
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351 | (1) |
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13.4 Synthetic Aperture Radar |
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351 | (11) |
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13.4.1 Analysis and Classification Techniques |
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351 | (5) |
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13.4.2 Example Applications |
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356 | (6) |
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362 | (2) |
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13.5.1 Analysis Techniques |
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362 | (1) |
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13.5.2 Example Application |
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363 | (1) |
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364 | (1) |
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13.7 Conclusions and Future Directions |
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365 | (10) |
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366 | (1) |
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367 | (8) |
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Section V Effective Use of Remote Sensing in Science and Management |
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375 | (28) |
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376 | (2) |
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14.2 Sampling Design and Accuracy Measures |
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378 | (4) |
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378 | (1) |
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14.2.2 Accuracy of Discrete Maps |
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379 | (2) |
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14.2.3 Accuracy of Continuous Maps |
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381 | (1) |
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14.3 Validation Literature Review |
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382 | (10) |
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14.3.1 Mapping Approaches |
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382 | (4) |
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386 | (2) |
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388 | (3) |
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14.3.4 Validation Limitations |
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391 | (1) |
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14.4 Conclusions and Recommendations |
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392 | (11) |
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395 | (1) |
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395 | (8) |
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15 Science and Management |
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403 | (26) |
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404 | (1) |
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15.2 Research and Management Needs |
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404 | (8) |
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15.2.1 Framing the Question |
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405 | (1) |
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15.2.2 User Versus Producer Needs |
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406 | (4) |
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15.2.3 Data Requirements and Limitations |
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410 | (2) |
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15.2.4 Balancing Costs and Product Quality |
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412 | (1) |
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15.3 Example Applications |
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412 | (11) |
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15.3.1 Resource Management |
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414 | (2) |
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15.3.2 Predictive Mapping of Fish Assemblages |
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416 | (2) |
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15.3.3 Threat and Damage Assessments |
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418 | (2) |
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15.3.4 Monitoring Temporal Changes |
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420 | (3) |
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15.4 Conclusions and Recommendations |
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423 | (6) |
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423 | (1) |
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423 | (6) |
Index |
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