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E-raamat: High-Dimensional Single Cell Analysis: Mass Cytometry, Multi-parametric Flow Cytometry and Bioinformatic Techniques

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This volume highlights the most interesting biomedical and clinical applications of high-dimensional flow and mass cytometry. It reviews current practical approaches used to perform high-dimensional experiments and addresses key bioinformatic techniques for the analysis of data sets involving dozens of parameters in millions of single cells. Topics include single cell cancer biology; studies of the human immunome; exploration of immunological cell types such as CD8+ T cells; decipherment of signaling processes of cancer; mass-tag cellular barcoding; analysis of protein interactions by proximity ligation assays; Cytobank, a platform for the analysis of cytometry data; computational analysis of high-dimensional flow cytometric data; computational deconvolution approaches for the description of intracellular signaling dynamics and hyperspectral cytometry. All 10 chapters of this book have been written by respected experts in their fields. It is an invaluable reference book for both basic and clinical researchers.

High-Dimensional Single-Cell Cancer Biology
1(22)
Jonathan M. Irish
Deon B. Doxie
Studying the Human Immunome: The Complexity of Comprehensive Leukocyte Immunophenotyping
23(38)
Angelique Biancotto
J. Philip McCoy
High-Dimensional Analysis of Human CD8+ T Cell Phenotype, Function, and Antigen Specificity
61(24)
Evan W. Newell
Wenyu Lin
Mass Cytometry to Decipher the Mechanism of Nongenetic Drug Resistance in Cancer
85(10)
Harris G. Fienberg
Garry P. Nolan
A Practical Guide to Multiplexed Mass Cytometry
95(16)
Nevena Zivanovic
Andrea Jacobs
Bernd Bodenmiller
Analysis of Protein Interactions in situ by Proximity Ligation Assays
111(16)
Bjorn Koos
Linda Andersson
Carl-Magnus Clausson
Karin Grannas
Axel Klaesson
Gaelle Cane
Ola Soderberg
Cytobank: Providing an Analytics Platform for Community Cytometry Data Analysis and Collaboration
127(32)
Tiffany J. Chen
Nikesh Kotecha
Computational Analysis of High-Dimensional Flow Cytometric Data for Diagnosis and Discovery
159(18)
Nima Aghaeepour
Ryan Brinkman
Shooting Movies of Signaling Network Dynamics with Multiparametric Cytometry
177(14)
Manfred Claassen
Hyperspectral Cytometry
191(20)
Gerald Gregori
Bartek Rajwa
Valery Patsekin
James Jones
Motohiro Furuki
Masanobu Yamamoto
J. Paul Robinson
Index 211