Preface |
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ix | |
About the Companion Website |
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xiii | |
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1 | (24) |
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1.1 Categorical Response Data |
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1 | (2) |
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1.2 Probability Distributions for Categorical Data |
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3 | (2) |
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1.3 Statistical Inference for a Proportion |
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5 | (5) |
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1.4 Statistical Inference for Discrete Data |
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10 | (3) |
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1.5 Bayesian Inference for Proportions * |
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13 | (4) |
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1.6 Using R Software for Statistical Inference about Proportions * |
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17 | (4) |
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21 | (4) |
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2 Analyzing Contingency Tables |
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25 | (40) |
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2.1 Probability Structure for Contingency Tables |
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26 | (3) |
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2.2 Comparing Proportions in 2 × 2 Contingency Tables |
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29 | (2) |
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31 | (5) |
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2.4 Chi-Squared Tests of Independence |
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36 | (6) |
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2.5 Testing Independence for Ordinal Variables |
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42 | (4) |
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2.6 Exact Frequentist and Bayesian Inference * |
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46 | (6) |
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2.7 Association in Three-Way Tables |
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52 | (4) |
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56 | (9) |
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3 Generalized Linear Models |
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65 | (24) |
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3.1 Components of a Generalized Linear Model |
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66 | (2) |
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3.2 Generalized Linear Models for Binary Data |
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68 | (4) |
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3.3 Generalized Linear Models for Counts and Rates |
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72 | (4) |
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3.4 Statistical Inference and Model Checking |
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76 | (6) |
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3.5 Fitting Generalized Linear Models |
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82 | (2) |
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84 | (5) |
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89 | (34) |
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4.1 The Logistic Regression Model |
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89 | (5) |
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4.2 Statistical Inference for Logistic Regression |
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94 | (4) |
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4.3 Logistic Regression with Categorical Predictors |
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98 | (4) |
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4.4 Multiple Logistic Regression |
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102 | (5) |
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4.5 Summarizing Effects in Logistic Regression |
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107 | (3) |
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4.6 Summarizing Predictive Power: Classification Tables, ROC Curves, and Multiple Correlation |
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110 | (3) |
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113 | (10) |
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5 Building and Applying Logistic Regression Models |
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123 | (36) |
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5.1 Strategies in Model Selection |
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123 | (7) |
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130 | (6) |
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5.3 Infinite Estimates in Logistic Regression |
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136 | (4) |
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5.4 Bayesian Inference, Penalized Likelihood, and Conditional Likelihood for Logistic Regression * |
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140 | (5) |
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5.5 Alternative Link Functions: Linear Probability and Probit Models * |
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145 | (5) |
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5.6 Sample Size and Power for Logistic Regression * |
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150 | (1) |
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151 | (8) |
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6 Multicategory Logit Models |
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159 | (34) |
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6.1 Baseline-Category Logit Models for Nominal Responses |
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159 | (8) |
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6.2 Cumulative Logit Models for Ordinal Responses |
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167 | (9) |
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6.3 Cumulative Link Models: Model Checking and Extensions * |
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176 | (8) |
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6.4 Paired-Category Logit Modeling of Ordinal Responses * |
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184 | (3) |
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187 | (6) |
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7 Loglinear Models for Contingency Tables and Counts |
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193 | (34) |
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7.1 Loglinear Models for Counts in Contingency Tables |
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194 | (6) |
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7.2 Statistical Inference for Loglinear Models |
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200 | (7) |
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7.3 The Loglinear -- Logistic Model Connection |
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207 | (3) |
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7.4 Independence Graphs and Collapsibility |
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210 | (4) |
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7.5 Modeling Ordinal Associations in Contingency Tables |
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214 | (3) |
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7.6 Loglinear Modeling of Count Response Variables * |
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217 | (4) |
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221 | (6) |
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8 Models for Matched Pairs |
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227 | (26) |
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8.1 Comparing Dependent Proportions for Binary Matched Pairs |
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228 | (2) |
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8.2 Marginal Models and Subject-Specific Models for Matched Pairs |
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230 | (5) |
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8.3 Comparing Proportions for Nominal Matched-Pairs Responses |
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235 | (4) |
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8.4 Comparing Proportions for Ordinal Matched-Pairs Responses |
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239 | (4) |
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8.5 Analyzing Rater Agreement * |
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243 | (4) |
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8.6 Bradley-Terry Model for Paired Preferences * |
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247 | (2) |
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249 | (4) |
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9 Marginal Modeling of Correlated, Clustered Responses |
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253 | (20) |
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9.1 Marginal Models Versus Subject-Specific Models |
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254 | (1) |
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9.2 Marginal Modeling: The Generalized Estimating Equations (GEE) Approach |
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255 | (5) |
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9.3 Marginal Modeling for Clustered Multinomial Responses |
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260 | (3) |
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9.4 Transitional Modeling, Given the Past |
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263 | (3) |
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9.5 Dealing with Missing Data * |
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266 | (2) |
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268 | (5) |
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10 Random Effects: Generalized Linear Mixed Models |
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273 | (26) |
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10.1 Random Effects Modeling of Clustered Categorical Data |
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273 | (5) |
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10.2 Examples: Random Effects Models for Binary Data |
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278 | (6) |
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10.3 Extensions to Multinomial Responses and Multiple Random Effect Terms |
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284 | (4) |
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10.4 Multilevel (Hierarchical) Models |
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288 | (3) |
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10.5 Latent Class Models * |
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291 | (4) |
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295 | (4) |
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11 Classification and Smoothing * |
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299 | (26) |
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11.1 Classification: Linear Discriminant Analysis |
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300 | (2) |
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11.2 Classification: Tree-Based Prediction |
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302 | (4) |
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11.3 Cluster Analysis for Categorical Responses |
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306 | (4) |
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11.4 Smoothing: Generalized Additive Models |
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310 | (3) |
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11.5 Regularization for High-Dimensional Categorical Data (Large p) |
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313 | (8) |
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321 | (4) |
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12 A Historical Tour of Categorical Data Analysis * |
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325 | (6) |
Appendix: Software for Categorical Data Analysis |
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331 | (18) |
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A.1 R for Categorical Data Analysis |
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331 | (1) |
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A.2 SAS for Categorical Data Analysis |
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332 | (10) |
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A.3 Stata for Categorical Data Analysis |
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342 | (4) |
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A.4 SPSS for Categorical Data Analysis |
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346 | (3) |
Brief Solutions to Odd-Numbered Exercises |
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349 | (14) |
Bibliography |
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363 | (2) |
Examples Index |
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365 | (4) |
Subject Index |
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369 | |