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E-raamat: Protein NMR: Methods and Protocols

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Protein NMR: Methods and ProtocolsSuurem pilt
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This volume covers state-of-the-art applications of solid-state and solution nuclear magnetic resonance( NMR) spectroscopy to study protein structure, dynamics and interactions. Chapters detail various aspects of data acquisition and processing, determination of the structure, multi-timescale dynamics of entities ranging from individual proteins to large macromolecular complexes to intact viral assemblies. The final two chapters will highlight the promise of NMR beyond field strengths of 1 GHz to study the structure, dynamics and interactions of a larger class of proteins and protein complexes of extraordinary biological interest.  Written in the highly successful Methods in Molecular Biology series format, chapters provide detailed laboratory protocols and troubleshooting tips that would be of great practical help to NMR spectroscopists with different levels of expertise.

Authoritative and cutting-edge, Protein NMR: Methods and Protocol aims to ensure successful results in the further study of this vital field.

Arvustused

The book covers current applications of solid-state and solution nuclear magnetic resonance spectroscopy to study protein structure, dynamics. and interactions. Written in the highly successful Methods in Molecular Biology series format, chapters provide detailed laboratory protocols with tips to tackle troubleshooting. The book has several high quality illustrations in color or black and white. The intended audience appears to be students, specialists, and those who are interested in NMR spectroscopy. (Omer Iqbal, Doody's Book Reviews, April, 2018)

Preface v
Contributors xi
1 NMR of Macromolecular Assemblies and Machines at 1 GHz and Beyond: New Transformative Opportunities for Molecular Structural Biology
1(36)
Caitlin M. Qttinn
Mingzhang Wang
Tatyana Polenova
2 Experimental Aspects of Polarization Optimized Experiments (POE) for Magic Angle Spinning Solid-State NMR of Microcrystalline and Membrane-Bound Proteins
37(18)
T. Gopinath
Gianluigi Veglia
3 Afterglow Solid-State NMR Spectroscopy
55(12)
Gilt Abramov
Nathaniel J. Traaseth
4 Filamentous Bacteriophage Viruses: Preparation, Magic-Angle Spinning Solid-State NMR Experiments, and Structure Determination
67(32)
Omry Morag
Nikolaos G. Sgourakis
Gili Abramov
Amir Goldbourt
5 Spherical Nanoparticle Supported Lipid Bilayers: A Tool for Modeling Protein Interactions with Curved Membranes
99(12)
Erin R. Tyndall
Fang Tian
6 Rapid Prediction of Multi-dimensional NMR Data Sets Using FANDAS
111(22)
Siddarth Narasimhan
Deni Mance
Cecilia Pinto
Markus Weingarth
Alexandre M.J. J. Bonvin
Marc Baldus
7 Strategies for Efficient Sample Preparation for Dynamic Nuclear Polarization Solid-State NMR of Biological Macromolecules
133(22)
Boris Itin
Ivan V. Sergeyev
8 In-Vitro Dissolution Dynamic Nuclear Polarization for Sensitivity Enhancement of NMR with Biological Molecules
155(14)
Yaewon Kim
Yunyi Wang
Hsueh-Ying Chen
Christian Hilty
9 Determination of Protein ps-ns Motions by High-Resolution Relaxometry
169(36)
Samuel F. Cousin
Pavel Kaderavek
Nicolas Bolik-Coulon
Fabien Ferrage
10 Characterizing Protein Dynamics with NMR R1ρ Relaxation Experiments
205(18)
Francesca Massi
Jeffrey W. Peng
11 CPMG Experiments for Protein Minor Conformer Structure Determination
223(20)
Anusha B. Gopalan
D. Flemming Hansen
Pramodh Vallurupalli
12 Probing the Atomic Structure of Transient Protein Contacts by Paramagnetic Relaxation Enhancement Solution NMR
243(14)
Vincenzo Venditti
Nicolas L. Fawzi
13 From Raw Data to Protein Backbone Chemical Shifts Using NMRFx Processing and NMRView J Analysis
257(54)
Bruce A. Johnson
14 Protein Structure Elucidation from NMR Data with the Program Xplor-NIH
311(30)
Guillermo A. Bermejo
Charles D. Schwieters
15 Practical Nonuniform Sampling and Non-Fourier Spectral Reconstruction for Multidimensional NMR
341(12)
Mark W. Maciejewski
Adam D. Schuyler
Jeffrey C. Hoch
16 Covariance NMR Processing and Analysis for Protein Assignment
353(22)
Bradley J. Harden
Dominique P. Frueh
17 Structures of Dynamic Protein Complexes: Hybrid Techniques to Study MAP Kinase Complexes and the ESCRT System
375(16)
Wolfgang Peti
Rebecca Page
Evzen Boura
Bartosz Rozycki
18 Implementation of the NMR CHEmical Shift Covariance Analysis (CHESCA): A Chemical Biologist's Approach to Allostery
391(16)
Stephen Boulton
Rajeevan Selvaratnam
Rashik Ahmed
Giuseppe Melacini
19 High-Efficiency Expression of Yeast-Derived G-Protein Coupled Receptors and 19F Labeling for Dynamical Studies
407(16)
Libin Ye
Alexander P. Orazietti
Aditya Pandey
R. Scott Prosser
20 Quantitative Determination of Interacting Protein Surfaces in Prokaryotes and Eukaryotes by Using In-Cell NMR Spectroscopy
423(22)
David S. Burz
Christopher M. DeMott
Asma Aldousary
Stephen Dansereau
Alexander Shekhtman
Index 445
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