Preface |
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Contributors |
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1 The History of Pyrosequencing® |
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3 | (14) |
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2 PyroMark® Instruments, Chemistry, and Software for Pyrosequencing® Analysis |
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17 | (12) |
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3 Software-Based Pyrogram® Evaluation |
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29 | (10) |
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4 Quantitative Validation and Quality Control of Pyrosequencing® Assays |
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39 | (10) |
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Part II Analysis of Genetic Variation |
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5 Extended KRAS and NRAS Mutation Profiling by Pyrosequencing® |
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49 | (14) |
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6 Universal BRAF State Detection by the Pyrosequencing®-Based U-BRAFV600 Assay |
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63 | (20) |
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7 Pyrosequencing®-Based Identification of Low-Frequency Mutations Enriched Through Enhanced- w-COLD-PCR |
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83 | (20) |
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8 Analysis of Mutational Hotspots in Routinely Processed Bone Marrow Trephines by Pyrosequencing® |
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103 | (12) |
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9 Analysis of Copy Number Variation by Pyrosequencing® Using Paralogous Sequences |
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115 | (8) |
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Marianne Kristiansen Kringen |
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10 Prenatal Diagnosis of Chromosomal Aneuploidies by Quantitative Pyrosequencing® |
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123 | (10) |
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11 HLA-B and HLA-C Supratyping by Pyrosequencing® |
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133 | (20) |
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12 Allele Quantification Pyrosequencing® at Designated SNP Sites to Detect Allelic Expression Imbalance and Loss-of-Heterozygosity |
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153 | (22) |
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Part III Analysis of DNA Methylation Patterns |
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13 Quantitative DNA Methylation Analysis by Pyrosequencing® |
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175 | (14) |
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14 Quantitative Methylation Analysis of the PCDHB Gene Cluster |
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189 | (12) |
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15 Assessment of Changes in Global DNA Methylation Levels by Pyrosequencing® of Repetitive Elements |
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201 | (8) |
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16 Global Analysis of DNA 5-Methylcytosine Using the Luminometric Methylation Assay, LUMA |
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209 | (12) |
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17 Limiting Dilution Bisulfite Pyrosequencing®: A Method for Methylation Analysis of Individual DNA Molecules in a Single or a Few Cells |
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221 | (20) |
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18 Detection of Loss of Imprinting by Pyrosequencing® |
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241 | (18) |
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19 Analysis of DNA Methylation Patterns in Single Blastocysts by Pyrosequencing® |
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259 | (12) |
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20 Allele-Specific DNA Methylation Detection by Pyrosequencing® |
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271 | (20) |
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21 SNP-based Quantification of Allele-specific DNA Methylation Patterns by Pyrosequencing® |
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291 | (24) |
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22 DNA Methylation Analysis of ChIP Products at Single Nucleotide Resolution by Pyrosequencing® |
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315 | (22) |
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Part IV Bacterial Typing and Identification |
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23 Multiplex Pyrosequencing®: Simultaneous Genotyping Based on SNPs from Distant Genomic Regions |
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337 | (12) |
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24 Detection of Drug-Resistant Mycobacterium tuberculosis |
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349 | (14) |
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25 Application of Pyrosequencing® in Food Biodefense |
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363 | (16) |
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26 Forensic Analysis of Mitochondrial and Autosomal Markers Using Pyrosequencing® |
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379 | (18) |
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27 Tissue-Specific DNA Methylation Patterns in Forensic Samples Detected by Pyrosequencing® |
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397 | (14) |
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Index |
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411 | |